RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 MAP4K5Q9Y4K4 846 aa13.44□□□□□ -0.26
C9orf47-203ENST00000375851 KCTD3Q9Y597 815 aa13.44□□□□□ -0.26
C9orf47-203ENST00000375851 RGPD5Q99666 1765 aa13.44□□□□□ -0.26
C9orf47-203ENST00000375851 DNAJA2O60884 412 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 DBTP11182 482 aaKnown RBP13.43□□□□□ -0.26
C9orf47-203ENST00000375851 LAPTM5Q13571 262 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 ACSBG2Q5FVE4 666 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 VITQ6UXI7 678 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 ZBTB46Q86UZ6 589 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 SLC43A3Q8NBI5 491 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 VANGL1Q8TAA9 524 aaPredicted RBP13.43□□□□□ -0.26
C9orf47-203ENST00000375851 SLC13A3Q8WWT9 602 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 HERVK_113Q902F9 699 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 OR52B2Q96RD2 323 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 OR2AG1Q9H205 316 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 RSL24D1Q9UHA3 163 aaKnown RBP13.43□□□□□ -0.26
C9orf47-203ENST00000375851 SLC7A8Q9UHI5 535 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 CYTH4Q9UIA0 394 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 N6AMT1Q9Y5N5 214 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 COMMD3-BMI1R4GMX3 469 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 ZNF487B1APH4 448 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 BEST1O76090 585 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 SCELO95171 688 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 MAT2AP31153 395 aaKnown RBP13.43□□□□□ -0.26
C9orf47-203ENST00000375851 ADARP55265 1226 aaKnown RBP13.43□□□□□ -0.26
C9orf47-203ENST00000375851 ILF3Q12906 894 aaKnown RBP eCLIP13.43□□□□□ -0.26
C9orf47-203ENST00000375851 ITGADQ13349 1161 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 C6orf52Q5T4I8 152 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 CAND1Q86VP6 1230 aaKnown RBP13.43□□□□□ -0.26
C9orf47-203ENST00000375851 GLB1L3Q8NCI6 653 aaPredicted RBP13.43□□□□□ -0.26
C9orf47-203ENST00000375851 WFIKKN2Q8TEU8 576 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 SLC22A17Q8WUG5 538 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 ZHX1-C8orf76Q96EF9 292 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 CENPNQ96H22 339 aaPredicted RBP13.43□□□□□ -0.26
C9orf47-203ENST00000375851 LMAN2LQ9H0V9 348 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 PDP1Q9P0J1 537 aaPredicted RBP13.43□□□□□ -0.26
C9orf47-203ENST00000375851 DNAJB4Q9UDY4 337 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 KLF11O14901 512 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 PI15O43692 258 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 ZNF623O75123 536 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 ECI2O75521 394 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 RASGRP1O95267 797 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 ETS2P15036 469 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 NCK1P16333 377 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 PCSK2P16519 638 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 EFNA1P20827 205 aaPredicted RBP13.43□□□□□ -0.26
C9orf47-203ENST00000375851 CTSKP43235 329 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 GDPD4Q6W3E5 623 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 GALNT5Q7Z7M9 940 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 C14orf80Q86SX3 495 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 CACTIN-AS1Q8N1I8 211 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 SMG8Q8ND04 991 aaKnown RBP13.43□□□□□ -0.26
C9orf47-203ENST00000375851 ADI1Q9BV57 179 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 TOR4AQ9NXH8 423 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 ZDHHC3Q9NYG2 299 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 GALPQ9UBC7 116 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 RUVBL1Q9Y265 456 aaKnown RBP13.43□□□□□ -0.26
C9orf47-203ENST00000375851 PSAT1Q9Y617 370 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 COLEC10Q9Y6Z7 277 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 PHRF1Q9P1Y6 1649 aaKnown RBP13.43□□□□□ -0.26
C9orf47-203ENST00000375851 WNT9AO14904 365 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 OR1F1O43749 312 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 HLA-DQA2P01906 255 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 WNT7BP56706 349 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 ERVK-8P63133 956 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 CHRNA6Q15825 494 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 KCTD21Q4G0X4 260 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 GALNT18Q6P9A2 607 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 RNF19BQ6ZMZ0 732 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 RELL1Q8IUW5 271 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 LRTOMTQ8WZ04 291 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 TRIB2Q92519 343 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 CDK15Q96Q40 435 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 SLITRK2Q9H156 845 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 SMPD3Q9NY59 655 aaPredicted RBP13.43□□□□□ -0.26
C9orf47-203ENST00000375851 ADAMTS5Q9UNA0 930 aa13.43□□□□□ -0.26
C9orf47-203ENST00000375851 FAM72CH0Y354 149 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 SLC22A2O15244 555 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 MTX2O75431 263 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 ZBTB11O95625 1053 aaPredicted RBP13.42□□□□□ -0.26
C9orf47-203ENST00000375851 GCNT6Q5T4J0 391 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 FAM72AQ5TYM5 149 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 FAM72DQ6L9T8 149 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 PTCHD4Q6ZW05 846 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 PIM3Q86V86 326 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 FAM72BQ86X60 149 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 CLDN19Q8N6F1 224 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 TEX47Q8TBZ9 253 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 TMEM209Q96SK2 561 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 USP29Q9HBJ7 922 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 PDLIM7Q9NR12 457 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 RASSF1Q9NS23 344 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 CHURC1-FNTBB4DL54 471 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 SCAMP1O15126 338 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 KERAO60938 352 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 SEC24AO95486 1093 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 RPS9P46781 194 aaKnown RBP13.42□□□□□ -0.26
C9orf47-203ENST00000375851 PNLIPRP1P54315 467 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 TAS2R41P59536 307 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 ARSIQ5FYB1 569 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms