RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 KCNH4Q9UQ05 1017 aa20.3■□□□□ 0.84
TMEFF1-201ENST00000374879 A0A0U1RQS6 177 aa20.3■□□□□ 0.84
TMEFF1-201ENST00000374879 H3BQ06 376 aaPredicted RBP20.3■□□□□ 0.84
TMEFF1-201ENST00000374879 AZIN1O14977 448 aa20.3■□□□□ 0.84
TMEFF1-201ENST00000374879 KATNA1O75449 491 aa20.3■□□□□ 0.84
TMEFF1-201ENST00000374879 SIX3O95343 332 aaPredicted RBP20.3■□□□□ 0.84
TMEFF1-201ENST00000374879 STARD3Q14849 445 aa20.3■□□□□ 0.84
TMEFF1-201ENST00000374879 ZNF517Q6ZMY9 492 aaPredicted RBP20.3■□□□□ 0.84
TMEFF1-201ENST00000374879 GALNT5Q7Z7M9 940 aa20.3■□□□□ 0.84
TMEFF1-201ENST00000374879 SVOPLQ8N434 492 aa20.3■□□□□ 0.84
TMEFF1-201ENST00000374879 ISG20Q96AZ6 181 aaKnown RBP20.3■□□□□ 0.84
TMEFF1-201ENST00000374879 L3HYPDHQ96EM0 354 aa20.3■□□□□ 0.84
TMEFF1-201ENST00000374879 SCN3BQ9NY72 215 aa20.3■□□□□ 0.84
TMEFF1-201ENST00000374879 TBC1D24Q9ULP9 559 aa20.3■□□□□ 0.84
TMEFF1-201ENST00000374879 BTBD3Q9Y2F9 522 aa20.3■□□□□ 0.84
TMEFF1-201ENST00000374879 U3KQV3 271 aa20.3■□□□□ 0.84
TMEFF1-201ENST00000374879 OR2A25A4D2G3 310 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 DCLK1O15075 740 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 RGS10O43665 173 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 CPNE3O75131 537 aaKnown RBP20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 PGK2P07205 417 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 IQCF3P0C7M6 154 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 PFKLP17858 780 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 VGLL4Q14135 290 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 SIM2Q14190 667 aaPredicted RBP20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 PCID2Q5JVF3 399 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 OSTM1Q86WC4 334 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 HORMAD1Q86X24 394 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 C2CD4AQ8NCU7 369 aaPredicted RBP20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 GTF2H4Q92759 462 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 NXF2Q9GZY0 626 aaKnown RBP20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 ENTPD7Q9NQZ7 604 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 ERVK13-1Q9NX77 482 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 TYW5A2RUC4 315 aaKnown RBP20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 CYP4B1P13584 511 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 NUDT1P36639 197 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 MBTD1Q05BQ5 628 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 HSPA14Q0VDF9 509 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 SLAMF1Q13291 335 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 PARP15Q460N3 678 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 CELF3Q5SZQ8 465 aaKnown RBP20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 EFCAB12Q6NXP0 572 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 AMER2Q8N7J2 671 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 NDRG1Q92597 394 aaKnown RBP20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 SLC38A4Q969I6 547 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 OMA1Q96E52 524 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 PPM1MQ96MI6 270 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 SPATA33Q96N06 139 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 BEX2Q9BXY8 128 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 RNF167Q9H6Y7 350 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 WDR90Q96KV7 1748 aa20.29■□□□□ 0.84
TMEFF1-201ENST00000374879 GBX1Q14549 363 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 RAP1GAP2Q684P5 730 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 NAPEPLDQ6IQ20 393 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 PLPPR4Q7Z2D5 763 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 APPL2Q8NEU8 664 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 TSPEARQ8WU66 669 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 RIPOR3Q96MK2 946 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 NSUN5Q96P11 429 aaKnown RBP20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 SLC7A5P2Q9GIP4 190 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 AASDHPPTQ9NRN7 309 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 TNFSF13BQ9Y275 285 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 GRIP1Q9Y3R0 1128 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 CTDSP2O14595 271 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 CAPN1P07384 714 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 FGF4P08620 206 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 CBLP22681 906 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 GADD45AP24522 165 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 DCTP40126 519 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 SLC15A1P46059 708 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 SULT1E1P49888 294 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 IL18R1Q13478 541 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 DLK2Q6UY11 383 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 ZDHHC17Q8IUH5 632 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 AFG1LQ8WV93 481 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 UGT2B28Q9BY64 529 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 SYTL2Q9HCH5 934 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 POLR3BQ9NW08 1133 aaPredicted RBP20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 MAT2BQ9NZL9 334 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 NUP205Q92621 2012 aa20.28■□□□□ 0.84
TMEFF1-201ENST00000374879 SHROOM3Q8TF72 1996 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 A0A1B0GTL3 188 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 HMX3A6NHT5 357 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 FAM72CH0Y354 149 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 SNX4O95219 450 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 CYBBP04839 570 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 STAG3L1P0CL83 205 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 ERCC2P18074 760 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 GGT1P19440 569 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 ATICP31939 592 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 POLR2JP52435 117 aaKnown RBP20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 HERVK_113P63132 956 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 SOWAHCQ53LP3 525 aaPredicted RBP20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 PRSS36Q5K4E3 855 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 PXDC1Q5TGL8 231 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 FAM72AQ5TYM5 149 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 FAM205BPQ63HN1 556 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 ARHGAP17Q68EM7 881 aa20.27■□□□□ 0.84
TMEFF1-201ENST00000374879 FAM72DQ6L9T8 149 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms