RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 ELP6Q0PNE2 266 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 RALGDSQ12967 914 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 MAPRE2Q15555 327 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 LEXMQ3ZCV2 418 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 SH2D4BQ5SQS7 431 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 PTCRAQ6ISU1 281 aaPredicted RBP12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 ZNF549Q6P9A3 640 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 UGT2A3Q6UWM9 527 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 DPPA4Q7L190 304 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 CACUL1Q86Y37 369 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 MMAAQ8IVH4 418 aaKnown RBP12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 CENPLQ8N0S6 344 aaPredicted RBP12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 CCNYL1Q8N7R7 359 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 GPR26Q8NDV2 337 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 XPR1Q9UBH6 696 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 ZNF7P17097 686 aaPredicted RBP12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 ATP5F1P24539 256 aaPredicted RBP12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 THOP1P52888 689 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 STX5Q13190 355 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 PDAP1Q13442 181 aaKnown RBP12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 CHRNA6Q15825 494 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 FAM83EQ2M2I3 478 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 C2orf27AQ580R0 203 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 KLC3Q6P597 504 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 SERPINA9Q86WD7 417 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 LSMEM2Q8N112 164 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 NXNL1Q96CM4 212 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 OLFM1Q99784 485 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 AARSD1Q9BTE6 412 aaKnown RBP12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 MRPL1Q9BYD6 325 aaKnown RBP12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 EPB41L1Q9H4G0 881 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 POPDC3Q9HBV1 291 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 EML4Q9HC35 981 aaKnown RBP12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 ETAA1Q9NY74 926 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 UTP6Q9NYH9 597 aaKnown RBP12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 TAS2R13Q9NYV9 303 aa12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.97□□□□□ -0.33
SQSTM1-201ENST00000360718 BCAS2O75934 225 aaPredicted RBP12.96□□□□□ -0.33
SQSTM1-201ENST00000360718 RHOBTB1O94844 696 aa12.96□□□□□ -0.33
SQSTM1-201ENST00000360718 PYGLP06737 847 aa12.96□□□□□ -0.33
SQSTM1-201ENST00000360718 ELFN1P0C7U0 828 aa12.96□□□□□ -0.33
SQSTM1-201ENST00000360718 CD72P21854 359 aa12.96□□□□□ -0.33
SQSTM1-201ENST00000360718 MMP12P39900 470 aa12.96□□□□□ -0.33
SQSTM1-201ENST00000360718 ADARP55265 1226 aaKnown RBP12.96□□□□□ -0.33
SQSTM1-201ENST00000360718 PFKPQ01813 784 aa12.96□□□□□ -0.33
SQSTM1-201ENST00000360718 GRSF1Q12849 480 aaKnown RBP eCLIP12.96□□□□□ -0.33
SQSTM1-201ENST00000360718 TMEM196Q5HYL7 178 aa12.96□□□□□ -0.33
SQSTM1-201ENST00000360718 AGAP9Q5VTM2 703 aa12.96□□□□□ -0.33
SQSTM1-201ENST00000360718 KIAA1211LQ6NV74 962 aa12.96□□□□□ -0.33
SQSTM1-201ENST00000360718 HSD11B1LQ7Z5J1 315 aa12.96□□□□□ -0.33
SQSTM1-201ENST00000360718 RBFAQ8N0V3 343 aa12.96□□□□□ -0.33
SQSTM1-201ENST00000360718 NAT14Q8WUY8 206 aa12.96□□□□□ -0.33
SQSTM1-201ENST00000360718 CLPBQ9H078 707 aa12.96□□□□□ -0.33
SQSTM1-201ENST00000360718 PCDHB1Q9Y5F3 818 aa12.96□□□□□ -0.33
SQSTM1-201ENST00000360718 TRPM6Q9BX84 2022 aa12.96□□□□□ -0.33
SQSTM1-201ENST00000360718 PRMT5O14744 637 aaPredicted RBP12.96□□□□□ -0.34
SQSTM1-201ENST00000360718 OR1I1O60431 355 aa12.96□□□□□ -0.34
SQSTM1-201ENST00000360718 ESR1P03372 595 aa12.96□□□□□ -0.34
SQSTM1-201ENST00000360718 PKMP14618 531 aaKnown RBP12.96□□□□□ -0.34
SQSTM1-201ENST00000360718 XRCC1P18887 633 aaPredicted RBP12.96□□□□□ -0.34
SQSTM1-201ENST00000360718 DRD1P21728 446 aa12.96□□□□□ -0.34
SQSTM1-201ENST00000360718 FDXRP22570 491 aa12.96□□□□□ -0.34
SQSTM1-201ENST00000360718 SLC26A3P40879 764 aa12.96□□□□□ -0.34
SQSTM1-201ENST00000360718 PSMD8P48556 350 aa12.96□□□□□ -0.34
SQSTM1-201ENST00000360718 CDKN2DP55273 166 aa12.96□□□□□ -0.34
SQSTM1-201ENST00000360718 MRPS22P82650 360 aaKnown RBP12.96□□□□□ -0.34
SQSTM1-201ENST00000360718 TIAL1Q01085 375 aaKnown RBP eCLIP12.96□□□□□ -0.34
SQSTM1-201ENST00000360718 PDCD2Q16342 344 aaPredicted RBP12.96□□□□□ -0.34
SQSTM1-201ENST00000360718 BHLHE22Q8NFJ8 381 aaPredicted RBP12.96□□□□□ -0.34
SQSTM1-201ENST00000360718 RAB7BQ96AH8 199 aa12.96□□□□□ -0.34
SQSTM1-201ENST00000360718 ULK4Q96C45 1275 aa12.96□□□□□ -0.34
SQSTM1-201ENST00000360718 MAELQ96JY0 434 aaKnown RBP12.96□□□□□ -0.34
SQSTM1-201ENST00000360718 GPR78Q96P69 363 aa12.96□□□□□ -0.34
SQSTM1-201ENST00000360718 FAM83DQ9H4H8 585 aa12.96□□□□□ -0.34
SQSTM1-201ENST00000360718 CD84Q9UIB8 345 aa12.96□□□□□ -0.34
SQSTM1-201ENST00000360718 COPG1Q9Y678 874 aaKnown RBP12.96□□□□□ -0.34
SQSTM1-201ENST00000360718 C15orf38-AP3S2A0A0A6YYH1 394 aa12.95□□□□□ -0.34
SQSTM1-201ENST00000360718 TRBV5-4A0A0C4DH59 114 aa12.95□□□□□ -0.34
SQSTM1-201ENST00000360718 E5RI56 91 aa12.95□□□□□ -0.34
SQSTM1-201ENST00000360718 PSMD11O00231 422 aa12.95□□□□□ -0.34
SQSTM1-201ENST00000360718 TRIM38O00635 465 aa12.95□□□□□ -0.34
SQSTM1-201ENST00000360718 ADAM23O75077 832 aa12.95□□□□□ -0.34
SQSTM1-201ENST00000360718 VPS26AO75436 327 aa12.95□□□□□ -0.34
SQSTM1-201ENST00000360718 LTA4HP09960 611 aaKnown RBP12.95□□□□□ -0.34
SQSTM1-201ENST00000360718 CCDC166P0CW27 439 aa12.95□□□□□ -0.34
SQSTM1-201ENST00000360718 ADRB3P13945 408 aa12.95□□□□□ -0.34
SQSTM1-201ENST00000360718 UGT1A6P19224 532 aa12.95□□□□□ -0.34
SQSTM1-201ENST00000360718 UGT1A1P22309 533 aa12.95□□□□□ -0.34
SQSTM1-201ENST00000360718 UGT1A4P22310 534 aa12.95□□□□□ -0.34
SQSTM1-201ENST00000360718 ACRV1P26436 265 aa12.95□□□□□ -0.34
SQSTM1-201ENST00000360718 UGT1A3P35503 534 aa12.95□□□□□ -0.34
SQSTM1-201ENST00000360718 UGT1A5P35504 534 aa12.95□□□□□ -0.34
SQSTM1-201ENST00000360718 CCR10P46092 362 aa12.95□□□□□ -0.34
SQSTM1-201ENST00000360718 BIRC2Q13490 618 aa12.95□□□□□ -0.34
SQSTM1-201ENST00000360718 CAMK2GQ13555 558 aaPredicted RBP12.95□□□□□ -0.34
SQSTM1-201ENST00000360718 CEACAM7Q14002 265 aa12.95□□□□□ -0.34
SQSTM1-201ENST00000360718 STARD3Q14849 445 aa12.95□□□□□ -0.34
SQSTM1-201ENST00000360718 UGT3A1Q6NUS8 523 aa12.95□□□□□ -0.34
SQSTM1-201ENST00000360718 GPR153Q6NV75 609 aa12.95□□□□□ -0.34
SQSTM1-201ENST00000360718 ERN2Q76MJ5 926 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms