RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 NAT16Q8N8M0 369 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 CPXM1Q96SM3 734 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 WDCPQ9H6R7 721 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 ZFP14Q9HCL3 533 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF490Q9ULM2 529 aaPredicted RBP6□□□□□ -1.45
VPS13B-203ENST00000358544 DFNA5O60443 496 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 DLX3O60479 287 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 IMPDH1P20839 514 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 MMP8P22894 467 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 AP1S2P56377 157 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 RPS3AP61247 264 aaKnown RBP6□□□□□ -1.45
VPS13B-203ENST00000358544 EIF5AP63241 154 aaKnown RBP6□□□□□ -1.45
VPS13B-203ENST00000358544 S100A12P80511 92 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 HNRNPA0Q13151 305 aaKnown RBP6□□□□□ -1.45
VPS13B-203ENST00000358544 AGAP7PQ5VUJ5 663 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 CGB2Q6NT52 195 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 ING5Q8WYH8 240 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 AP2M1Q96CW1 435 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 VMP1Q96GC9 406 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 NPLQ9BXD5 320 aaPredicted RBP6□□□□□ -1.45
VPS13B-203ENST00000358544 POLR2J3Q9H1A7 115 aaKnown RBP6□□□□□ -1.45
VPS13B-203ENST00000358544 TBC1D17Q9HA65 648 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 CRYL1Q9Y2S2 319 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 AXIN2Q9Y2T1 843 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 PRG2P13727 222 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 EPB42P16452 691 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 IL4RP24394 825 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 NTSP30990 170 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 ALDH9A1P49189 494 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 FGL2Q14314 439 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 SH3PXD2AQ5TCZ1 1133 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 TATDN1Q6P1N9 297 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 SMARCD1Q96GM5 515 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 HCN3Q9P1Z3 774 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 IL1R1P14778 569 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 HECTD2Q5U5R9 776 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 KIAA1841Q6NSI8 718 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 CHST15Q7LFX5 561 aaPredicted RBP6□□□□□ -1.45
VPS13B-203ENST00000358544 OR5J2Q8NH18 312 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 HEMK1Q9Y5R4 338 aaPredicted RBP6□□□□□ -1.45
VPS13B-203ENST00000358544 CAPN14A8MX76 684 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 DISC1C4P0D8 188 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 PITPNM1O00562 1244 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 CSDE1O75534 798 aaKnown RBP6□□□□□ -1.45
VPS13B-203ENST00000358544 NTSR2O95665 410 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 IRF9Q00978 393 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 TTLL4Q14679 1199 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 ELMOD1Q8N336 334 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 SLC45A3Q96JT2 553 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 TSNAXQ99598 290 aaKnown RBP6□□□□□ -1.45
VPS13B-203ENST00000358544 STK32BQ9NY57 414 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 DOCK6Q96HP0 2047 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 SUPT20HL2P0C7V6 817 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 BMP2P12643 396 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 TAL1P17542 331 aaPredicted RBP6□□□□□ -1.45
VPS13B-203ENST00000358544 AQP1P29972 269 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 ICAM3P32942 547 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 CSTF1Q05048 431 aaKnown RBP6□□□□□ -1.45
VPS13B-203ENST00000358544 SUPT20HL1Q3ZLR7 823 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 AMIGO1Q86WK6 493 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 CHERPQ8IWX8 916 aaKnown RBP6□□□□□ -1.45
VPS13B-203ENST00000358544 UBQLNLQ8IYU4 475 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 OR10G2Q8NGC3 310 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 HSH2DQ96JZ2 352 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 MFSD14AQ96MC6 490 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 RDH12Q96NR8 316 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 RPRD1AQ96P16 312 aaPredicted RBP6□□□□□ -1.45
VPS13B-203ENST00000358544 SNX18Q96RF0 628 aa6□□□□□ -1.45
VPS13B-203ENST00000358544 ODC1P11926 461 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 HUNKP57058 714 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 NFE2Q16621 373 aaPredicted RBP5.99□□□□□ -1.45
VPS13B-203ENST00000358544 TIFABQ6ZNK6 161 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 TICAM1Q8IUC6 712 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 SPARTQ8N0X7 666 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 MOSPD2Q8NHP6 518 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 CD101Q93033 1021 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 TMEM209Q96SK2 561 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 TMEM233B4DJY2 109 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 SSX5O60225 188 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 CYP2C18P33260 490 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 PIGGQ5H8A4 983 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 ZDHHC21Q8IVQ6 265 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 Q8N9G6 341 aaPredicted RBP5.99□□□□□ -1.45
VPS13B-203ENST00000358544 SNIP1Q8TAD8 396 aaKnown RBP5.99□□□□□ -1.45
VPS13B-203ENST00000358544 SLC13A3Q8WWT9 602 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 MED8Q96G25 268 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 OCEL1Q9H607 264 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 AMBNQ9NP70 447 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 RSL1D1O76021 490 aaKnown RBP5.99□□□□□ -1.45
VPS13B-203ENST00000358544 NFICP08651 508 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 FOSL1P15407 271 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 NPY5RQ15761 445 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 SCUBE3Q8IX30 993 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 CFAP206Q8IYR0 622 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 C11orf65Q8NCR3 313 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 OR10A6Q8NH74 314 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 CNIH3Q8TBE1 160 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 LPAR1Q92633 364 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 TFAP2CQ92754 450 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 TIGARQ9NQ88 270 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms