RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 MAGEC3Q8TD91 643 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 SSC4DQ8WTU2 575 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 PDCD6IPQ8WUM4 868 aaKnown RBP8.13□□□□□ -1.11
CD44-205ENST00000352818 WBP2Q969T9 261 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 BIRC7Q96CA5 298 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 PTCD3Q96EY7 689 aaKnown RBP8.13□□□□□ -1.11
CD44-205ENST00000352818 ELMO2Q96JJ3 720 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 GPR78Q96P69 363 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 OMDQ99983 421 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 MRPL57Q9BQC6 102 aaKnown RBP8.13□□□□□ -1.11
CD44-205ENST00000352818 MUC3BQ9H195 1237 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 MRPL46Q9H2W6 279 aaKnown RBP8.13□□□□□ -1.11
CD44-205ENST00000352818 NOD2Q9HC29 1040 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 KLC4Q9NSK0 619 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 INTS10Q9NVR2 710 aaKnown RBP8.13□□□□□ -1.11
CD44-205ENST00000352818 NLE1Q9NVX2 485 aaPredicted RBP8.13□□□□□ -1.11
CD44-205ENST00000352818 ZNF358Q9NW07 568 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 HACD3Q9P035 362 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 DNAJC16Q9Y2G8 782 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 OR51B4Q9Y5P0 310 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 CPQQ9Y646 472 aa8.13□□□□□ -1.11
CD44-205ENST00000352818 CCDC189A1A4V9 331 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 CCDC78A2IDD5 438 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 CAPN14A8MX76 684 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 SLCO1B7G3V0H7 640 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 H7C0S8 307 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 FCHO1O14526 889 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 ZNF195O14628 629 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 WNT9AO14904 365 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 VILLO15195 856 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 PHGDHO43175 533 aaKnown RBP8.12□□□□□ -1.11
CD44-205ENST00000352818 ITM2AO43736 263 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 DFNA5O60443 496 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 NPHS1O60500 1241 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 TSPAN3O60637 253 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 TBL1XO60907 577 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 TMCC1O94876 653 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 AGFG2O95081 481 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 CD160O95971 181 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 ADH1CP00326 375 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 PRLP01236 227 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 SERPINA6P08185 405 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 LTA4HP09960 611 aaKnown RBP8.12□□□□□ -1.11
CD44-205ENST00000352818 IRF1P10914 325 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 HOXB4P17483 251 aaPredicted RBP8.12□□□□□ -1.11
CD44-205ENST00000352818 CD9P21926 228 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 FDXRP22570 491 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 OXTRP30559 389 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 HNRNPH1P31943 449 aaKnown RBP8.12□□□□□ -1.11
CD44-205ENST00000352818 RGRP47804 291 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 CSNK1DP48730 415 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 DUSP3P51452 185 aaPredicted RBP8.12□□□□□ -1.11
CD44-205ENST00000352818 ARSDP51689 593 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 COPAP53621 1224 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 SLC12A2P55011 1212 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 AQP5P55064 265 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 TAS2R39P59534 338 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 DNAJB13P59910 316 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 RPL26P61254 145 aaKnown RBP8.12□□□□□ -1.11
CD44-205ENST00000352818 AP1S1P61966 158 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 KCNJ2P63252 427 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 PRAMEP78395 509 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 ARF5P84085 180 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 ZBTB16Q05516 673 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 ITGA9Q13797 1035 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 RCN2Q14257 317 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 FAM83EQ2M2I3 478 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 TECRLQ5HYJ1 363 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 NCEH1Q6PIU2 408 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 CNSTQ6PJW8 725 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 AFTPHQ6ULP2 937 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 PIWIL4Q7Z3Z4 852 aaKnown RBP8.12□□□□□ -1.11
CD44-205ENST00000352818 KDELC2Q7Z4H8 507 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 TBC1D1Q86TI0 1168 aaPredicted RBP8.12□□□□□ -1.11
CD44-205ENST00000352818 FAM124AQ86V42 546 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 TMEM25Q86YD3 366 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 TMPRSS6Q8IU80 811 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 CEP97Q8IW35 865 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 PARP9Q8IXQ6 854 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 KIRREL3Q8IZU9 778 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 FSTL5Q8N475 847 aaPredicted RBP8.12□□□□□ -1.11
CD44-205ENST00000352818 KIAA1958Q8N8K9 716 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 GPATCH11Q8N954 259 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 KCTD4Q8WVF5 259 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 HDAC10Q969S8 669 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 SLC7A6OSQ96CW6 309 aaPredicted RBP8.12□□□□□ -1.11
CD44-205ENST00000352818 CCDC126Q96EE4 140 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 ALG14Q96F25 216 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 NSL1Q96IY1 281 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 DNAJC1Q96KC8 554 aaKnown RBP8.12□□□□□ -1.11
CD44-205ENST00000352818 TCF12Q99081 682 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 SPON2Q9BUD6 331 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 GATA5Q9BWX5 397 aaPredicted RBP8.12□□□□□ -1.11
CD44-205ENST00000352818 ADGRE3Q9BY15 652 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 NMUR2Q9GZQ4 415 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 DRC3Q9H069 523 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 CDH19Q9H159 772 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 PCED1AQ9H1Q7 454 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 EBF2Q9HAK2 575 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 FBXO6Q9NRD1 293 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms