RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 NPTX1Q15818 432 aa18.39■□□□□ 0.54
SCARF1-202ENST00000348987 ARTNQ5T4W7 220 aa18.39■□□□□ 0.54
SCARF1-202ENST00000348987 TTC23LQ6PF05 361 aa18.39■□□□□ 0.54
SCARF1-202ENST00000348987 TMEM199Q8N511 208 aa18.39■□□□□ 0.54
SCARF1-202ENST00000348987 ATPAF2Q8N5M1 289 aa18.39■□□□□ 0.54
SCARF1-202ENST00000348987 C2orf69Q8N8R5 385 aa18.39■□□□□ 0.54
SCARF1-202ENST00000348987 RDH12Q96NR8 316 aa18.39■□□□□ 0.54
SCARF1-202ENST00000348987 TREX1Q9NSU2 369 aa18.39■□□□□ 0.54
SCARF1-202ENST00000348987 MPP6Q9NZW5 540 aa18.39■□□□□ 0.54
SCARF1-202ENST00000348987 FBXO10Q9UK96 956 aa18.39■□□□□ 0.54
SCARF1-202ENST00000348987 CARD8Q9Y2G2 431 aa18.39■□□□□ 0.54
SCARF1-202ENST00000348987 SLC45A1Q9Y2W3 748 aa18.39■□□□□ 0.54
SCARF1-202ENST00000348987 PCDHGB1Q9Y5G3 927 aa18.39■□□□□ 0.54
SCARF1-202ENST00000348987 PCDHGA10Q9Y5H3 936 aa18.39■□□□□ 0.54
SCARF1-202ENST00000348987 GNGT2O14610 69 aa18.39■□□□□ 0.53
SCARF1-202ENST00000348987 NDST3O95803 873 aa18.39■□□□□ 0.53
SCARF1-202ENST00000348987 CYBBP04839 570 aa18.39■□□□□ 0.53
SCARF1-202ENST00000348987 HLA-DQB2P05538 268 aa18.39■□□□□ 0.53
SCARF1-202ENST00000348987 PAMP19021 973 aa18.39■□□□□ 0.53
SCARF1-202ENST00000348987 FMO3P31513 532 aa18.39■□□□□ 0.53
SCARF1-202ENST00000348987 ARL1P40616 181 aaPredicted RBP18.39■□□□□ 0.53
SCARF1-202ENST00000348987 MAP2K5Q13163 448 aa18.39■□□□□ 0.53
SCARF1-202ENST00000348987 CLCA4Q14CN2 919 aa18.39■□□□□ 0.53
SCARF1-202ENST00000348987 ACOX1Q15067 660 aa18.39■□□□□ 0.53
SCARF1-202ENST00000348987 PCSK7Q16549 785 aa18.39■□□□□ 0.53
SCARF1-202ENST00000348987 FBXO48Q5FWF7 155 aa18.39■□□□□ 0.53
SCARF1-202ENST00000348987 VARS2Q5ST30 1063 aaKnown RBP18.39■□□□□ 0.53
SCARF1-202ENST00000348987 ZNF691Q5VV52 312 aa18.39■□□□□ 0.53
SCARF1-202ENST00000348987 KANK2Q63ZY3 851 aa18.39■□□□□ 0.53
SCARF1-202ENST00000348987 ENPP6Q6UWR7 440 aa18.39■□□□□ 0.53
SCARF1-202ENST00000348987 AGMOQ6ZNB7 445 aa18.39■□□□□ 0.53
SCARF1-202ENST00000348987 FBXO30Q8TB52 745 aa18.39■□□□□ 0.53
SCARF1-202ENST00000348987 PPM1MQ96MI6 270 aa18.39■□□□□ 0.53
SCARF1-202ENST00000348987 GLOD4Q9HC38 313 aa18.39■□□□□ 0.53
SCARF1-202ENST00000348987 CSNK1G1Q9HCP0 422 aa18.39■□□□□ 0.53
SCARF1-202ENST00000348987 MAGEL2Q9UJ55 1249 aa18.39■□□□□ 0.53
SCARF1-202ENST00000348987 LEF1Q9UJU2 399 aaPredicted RBP18.39■□□□□ 0.53
SCARF1-202ENST00000348987 CDH9Q9ULB4 789 aa18.39■□□□□ 0.53
SCARF1-202ENST00000348987 AAR2Q9Y312 384 aaKnown RBP18.39■□□□□ 0.53
SCARF1-202ENST00000348987 UGT2A1Q9Y4X1 527 aa18.39■□□□□ 0.53
SCARF1-202ENST00000348987 PRMT5O14744 637 aaPredicted RBP18.38■□□□□ 0.53
SCARF1-202ENST00000348987 SCO2O43819 266 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 PAGE1O75459 146 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 ANGPTL1O95841 491 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 POMCP01189 267 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 CDKN2DP55273 166 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 EPS8Q12929 822 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 PFKFB4Q16877 469 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 ZNF181Q2M3W8 571 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 HABP4Q5JVS0 413 aaKnown RBP18.38■□□□□ 0.53
SCARF1-202ENST00000348987 CCBE1Q6UXH8 406 aaPredicted RBP18.38■□□□□ 0.53
SCARF1-202ENST00000348987 CELF2-AS1Q8N7Q2 184 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 PJA1Q8NG27 643 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 RHNO1Q9BSD3 238 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 OR2B2Q9GZK3 357 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 UNCXA6NJT0 531 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 SLC22A3O75751 556 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 B3GAT3O94766 335 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 MOCS2O96007 188 aaPredicted RBP18.38■□□□□ 0.53
SCARF1-202ENST00000348987 PRKCAP17252 672 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 HUNKP57058 714 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 FXNQ16595 210 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 NKG7Q16617 165 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 MORN1Q5T089 497 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 RFPL4BQ6ZWI9 263 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 TMEM86AQ8N2M4 240 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 OR10T2Q8NGX3 314 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 FIG4Q92562 907 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 ZHX1-C8orf76Q96EF9 292 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 OSGIN1Q9UJX0 560 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 PTCH2Q9Y6C5 1203 aa18.38■□□□□ 0.53
SCARF1-202ENST00000348987 CCL22O00626 93 aa18.37■□□□□ 0.53
SCARF1-202ENST00000348987 FADS2O95864 444 aaKnown RBP18.37■□□□□ 0.53
SCARF1-202ENST00000348987 GOT2P00505 430 aaKnown RBP18.37■□□□□ 0.53
SCARF1-202ENST00000348987 ANXA6P08133 673 aa18.37■□□□□ 0.53
SCARF1-202ENST00000348987 CCDC159P0C7I6 412 aa18.37■□□□□ 0.53
SCARF1-202ENST00000348987 POLR2JP52435 117 aaKnown RBP18.37■□□□□ 0.53
SCARF1-202ENST00000348987 PLIN5Q00G26 463 aa18.37■□□□□ 0.53
SCARF1-202ENST00000348987 RAPSNQ13702 412 aa18.37■□□□□ 0.53
SCARF1-202ENST00000348987 TRIP4Q15650 581 aaPredicted RBP18.37■□□□□ 0.53
SCARF1-202ENST00000348987 UPP1Q16831 310 aa18.37■□□□□ 0.53
SCARF1-202ENST00000348987 SCIMPQ6UWF3 145 aa18.37■□□□□ 0.53
SCARF1-202ENST00000348987 C6orf62Q9GZU0 229 aaPredicted RBP18.37■□□□□ 0.53
SCARF1-202ENST00000348987 RBM22Q9NW64 420 aaKnown RBP eCLIP18.37■□□□□ 0.53
SCARF1-202ENST00000348987 CAB39Q9Y376 341 aaPredicted RBP18.37■□□□□ 0.53
SCARF1-202ENST00000348987 TYW5A2RUC4 315 aaKnown RBP18.37■□□□□ 0.53
SCARF1-202ENST00000348987 FTH1P02794 183 aa18.37■□□□□ 0.53
SCARF1-202ENST00000348987 CCNCP24863 283 aa18.37■□□□□ 0.53
SCARF1-202ENST00000348987 IL12AP29459 219 aa18.37■□□□□ 0.53
SCARF1-202ENST00000348987 ADRA1AP35348 466 aa18.37■□□□□ 0.53
SCARF1-202ENST00000348987 MASP1P48740 699 aa18.37■□□□□ 0.53
SCARF1-202ENST00000348987 CLK3P49761 638 aaKnown RBP18.37■□□□□ 0.53
SCARF1-202ENST00000348987 TAF1CQ15572 869 aaPredicted RBP18.37■□□□□ 0.53
SCARF1-202ENST00000348987 KIAA0930Q6ICG6 404 aaPredicted RBP18.37■□□□□ 0.53
SCARF1-202ENST00000348987 FKBP9P1Q75LS8 142 aa18.37■□□□□ 0.53
SCARF1-202ENST00000348987 HID1Q8IV36 788 aa18.37■□□□□ 0.53
SCARF1-202ENST00000348987 KLHDC8BQ8IXV7 354 aa18.37■□□□□ 0.53
SCARF1-202ENST00000348987 ASCC1Q8N9N2 400 aaKnown RBP18.37■□□□□ 0.53
SCARF1-202ENST00000348987 PROX1Q92786 737 aa18.37■□□□□ 0.53
SCARF1-202ENST00000348987 FCRL2Q96LA5 508 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms