RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 HTR1AP08908 422 aa15.65■□□□□ 0.1
HMGA1-202ENST00000347617 NCK1P16333 377 aa15.65■□□□□ 0.1
HMGA1-202ENST00000347617 POLR2JP52435 117 aaKnown RBP15.65■□□□□ 0.1
HMGA1-202ENST00000347617 GP2P55259 537 aaKnown RBP15.65■□□□□ 0.1
HMGA1-202ENST00000347617 RABL3Q5HYI8 236 aa15.65■□□□□ 0.1
HMGA1-202ENST00000347617 TMEM214Q6NUQ4 689 aaKnown RBP15.65■□□□□ 0.1
HMGA1-202ENST00000347617 NANOGNBQ7Z5D8 188 aa15.65■□□□□ 0.1
HMGA1-202ENST00000347617 GALNT13Q8IUC8 556 aa15.65■□□□□ 0.1
HMGA1-202ENST00000347617 CILP2Q8IUL8 1156 aa15.65■□□□□ 0.1
HMGA1-202ENST00000347617 SVOPQ8N4V2 548 aa15.65■□□□□ 0.1
HMGA1-202ENST00000347617 OR13J1Q8NGT2 312 aa15.65■□□□□ 0.1
HMGA1-202ENST00000347617 SPATA22Q8NHS9 363 aa15.65■□□□□ 0.1
HMGA1-202ENST00000347617 ZFP90Q8TF47 636 aa15.65■□□□□ 0.1
HMGA1-202ENST00000347617 FBLIM1Q8WUP2 373 aa15.65■□□□□ 0.1
HMGA1-202ENST00000347617 EHD1Q9H4M9 534 aa15.65■□□□□ 0.1
HMGA1-202ENST00000347617 GORASP2Q9H8Y8 452 aa15.65■□□□□ 0.1
HMGA1-202ENST00000347617 TMEM39AQ9NV64 488 aa15.65■□□□□ 0.1
HMGA1-202ENST00000347617 FNIP2Q9P278 1114 aa15.65■□□□□ 0.1
HMGA1-202ENST00000347617 PCDHGA8Q9Y5G5 932 aa15.65■□□□□ 0.1
HMGA1-202ENST00000347617 ORC6Q9Y5N6 252 aa15.65■□□□□ 0.1
HMGA1-202ENST00000347617 DGKBQ9Y6T7 804 aa15.65■□□□□ 0.1
HMGA1-202ENST00000347617 SLC16A6O15403 523 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 B4GAT1O43505 415 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 LRIG2O94898 1065 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 MYCP01106 439 aaPredicted RBP15.64■□□□□ 0.1
HMGA1-202ENST00000347617 CLTBP09497 229 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 BMP4P12644 408 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 CD1DP15813 335 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 POLR2EP19388 210 aaKnown RBP15.64■□□□□ 0.1
HMGA1-202ENST00000347617 FDXRP22570 491 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 NFKBIAP25963 317 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 SUOXP51687 545 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 KPNA1P52294 538 aaPredicted RBP15.64■□□□□ 0.1
HMGA1-202ENST00000347617 CXCR4P61073 352 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 INAVAQ3KP66 663 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 LDLRAP1Q5SW96 308 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 ZNF691Q5VV52 312 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 MSANTD2Q6P1R3 559 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 RPS27LQ71UM5 84 aaKnown RBP15.64■□□□□ 0.1
HMGA1-202ENST00000347617 KIAA2013Q8IYS2 634 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 SCAMP5Q8TAC9 235 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 DYNC2LI1Q8TCX1 351 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 ANKRD49Q8WVL7 239 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 MBOAT4Q96T53 435 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 TTPALQ9BTX7 342 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 HERC2P3Q9BVR0 1158 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 TRIT1Q9H3H1 467 aaKnown RBP15.64■□□□□ 0.1
HMGA1-202ENST00000347617 SMOC2Q9H3U7 446 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 CCNB1IP1Q9NPC3 277 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 TPRKBQ9Y3C4 175 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 BACE2Q9Y5Z0 518 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 A3GALT2U3KPV4 340 aa15.64■□□□□ 0.1
HMGA1-202ENST00000347617 ASPDHA6ND91 283 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 CRCPO75575 148 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 ITGAMP11215 1152 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 IL7RP16871 459 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 GGT1P19440 569 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 MTHFRP42898 656 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 ALDH7A1P49419 539 aaKnown RBP15.64■□□□□ 0.09
HMGA1-202ENST00000347617 RABGGTBP53611 331 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 TPTEP56180 551 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 ERVK-8P63133 956 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 PPP2R2BQ00005 443 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 CD300CQ08708 224 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 SULT1C3Q6IMI6 304 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 UGT3A1Q6NUS8 523 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 SLC22A16Q86VW1 577 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 OR8J3Q8NGG0 315 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 RHOXF1Q8NHV9 184 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 PEX13Q92968 403 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 VPS33AQ96AX1 596 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 YIPF6Q96EC8 236 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 DGCR6LQ9BY27 220 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 ASPSCR1Q9BZE9 553 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 CATSPERBQ9H7T0 1116 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 SCUBE2Q9NQ36 999 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 ABI2Q9NYB9 513 aaPredicted RBP15.64■□□□□ 0.09
HMGA1-202ENST00000347617 TESMINQ9Y4I5 508 aa15.64■□□□□ 0.09
HMGA1-202ENST00000347617 SCN5AQ14524 2016 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 MICAL3Q7RTP6 2002 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 VWA8A3KMH1 1905 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 CENPBD1B2RD01 187 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 IRAK2O43187 625 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 ASNA1O43681 348 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 SNX2O60749 519 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 MT-CYBP00156 380 aaPredicted RBP15.63■□□□□ 0.09
HMGA1-202ENST00000347617 C1RP00736 705 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 OR4Q2P0C623 313 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 UROSP10746 265 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 JUNDP17535 347 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 CHRM3P20309 590 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 ACVR2AP27037 513 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 GATMP50440 423 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 SERPINH1P50454 418 aaKnown RBP15.63■□□□□ 0.09
HMGA1-202ENST00000347617 TUBA1BP68363 451 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 NRG1Q02297 640 aaPredicted RBP15.63■□□□□ 0.09
HMGA1-202ENST00000347617 CD47Q08722 323 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 FADDQ13158 208 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 XKR7Q5GH72 579 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 GPR158Q5T848 1215 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms