RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 RAD23AP54725 363 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 SQLEQ14534 574 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 HFE2Q6ZVN8 426 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 RPS27LQ71UM5 84 aaKnown RBP10.75□□□□□ -0.69
CLCN6-202ENST00000346436 AMZ2Q86W34 360 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 MMAAQ8IVH4 418 aaKnown RBP10.75□□□□□ -0.69
CLCN6-202ENST00000346436 FSTL5Q8N475 847 aaPredicted RBP10.75□□□□□ -0.69
CLCN6-202ENST00000346436 DQX1Q8TE96 717 aaKnown RBP10.75□□□□□ -0.69
CLCN6-202ENST00000346436 OVCA2Q8WZ82 227 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 CEP44Q9C0F1 390 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 ABCG8Q9H221 673 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 IGSF9Q9P2J2 1179 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 TRPS1Q9UHF7 1281 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 FAM234BA2RU67 622 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 WNT9AO14904 365 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 UGT1A1P22309 533 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 HTRA3P83110 453 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 ANGPT1Q15389 498 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 FRMD7Q6ZUT3 714 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 MICU2Q8IYU8 434 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 DLG3Q92796 817 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 GFM2Q969S9 779 aaKnown RBP10.75□□□□□ -0.69
CLCN6-202ENST00000346436 ZNF354BQ96LW1 612 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 RTP3Q9BQQ7 232 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 SLC9A8Q9Y2E8 581 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 KHNYNO15037 678 aaKnown RBP10.75□□□□□ -0.69
CLCN6-202ENST00000346436 B3GALT2O43825 422 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 RPL4P36578 427 aaKnown RBP10.75□□□□□ -0.69
CLCN6-202ENST00000346436 CHRNA4P43681 627 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 CLK1P49759 484 aaKnown RBP10.75□□□□□ -0.69
CLCN6-202ENST00000346436 SELENOVP59797 346 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 IL5RAQ01344 420 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 ZNF155Q12901 538 aaPredicted RBP10.75□□□□□ -0.69
CLCN6-202ENST00000346436 SLC44A4Q53GD3 710 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 TMEM63BQ5T3F8 832 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 ANXA8L1Q5VT79 327 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 ARHGAP17Q68EM7 881 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 CWF19L1Q69YN2 538 aaKnown RBP10.75□□□□□ -0.69
CLCN6-202ENST00000346436 BRAT1Q6PJG6 821 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 CAND1Q86VP6 1230 aaKnown RBP10.75□□□□□ -0.69
CLCN6-202ENST00000346436 SPPL2CQ8IUH8 684 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 DHRSXQ8N5I4 330 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 ACTRT2Q8TDY3 377 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 PHF12Q96QT6 1004 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 PCDHAC1Q9H158 963 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 TNKS2Q9H2K2 1166 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 RNF39Q9H2S5 420 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 SDHAF3Q9NRP4 125 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 CYP8B1Q9UNU6 501 aa10.75□□□□□ -0.69
CLCN6-202ENST00000346436 FFAR3O14843 346 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 GPR42O15529 346 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 CA3P07451 260 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 S100A5P33763 92 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 TRIM16LQ309B1 348 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 LDLRAD1Q5T700 205 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 CDC73Q6P1J9 531 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 ZNF621Q6ZSS3 439 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 PIWIL4Q7Z3Z4 852 aaKnown RBP10.74□□□□□ -0.69
CLCN6-202ENST00000346436 CDYL2Q8N8U2 506 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 FAM47BQ8NA70 645 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 LRTOMTQ8WZ04 291 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 TM9SF4Q92544 642 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 FETUBQ9UGM5 382 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 ULK1O75385 1050 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 SERPINB7O75635 380 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 GIMD1P0DJR0 217 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 NT5EP21589 574 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 CXCL12P48061 93 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 HNMTP50135 292 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 NEK2P51955 445 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 SLC18A2Q05940 514 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 LGALS3BPQ08380 585 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 MTAPQ13126 283 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 C15orf39Q6ZRI6 1047 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 KRT77Q7Z794 578 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 TMEM126BQ8IUX1 230 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 TTLQ8NG68 377 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 MAPK15Q8TD08 544 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 FAM3CQ92520 227 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 C12orf66Q96MD2 445 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 XYLT2Q9H1B5 865 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 GLOD4Q9HC38 313 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 PIAS3Q9Y6X2 628 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 EDN1P05305 212 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 GRIA2P42262 883 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 PCYT1AP49585 367 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 DPYSL2Q16555 572 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 MLIPQ5VWP3 458 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.74□□□□□ -0.69
CLCN6-202ENST00000346436 UBR7Q8N806 425 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 LPGAT1Q92604 370 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 MR1Q95460 341 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 ZDHHC12Q96GR4 267 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 PCED1BQ96HM7 432 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 RIBC2Q9H4K1 309 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 SERINC1Q9NRX5 453 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 FTSJ1Q9UET6 329 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 RAPGEFL1Q9UHV5 662 aa10.74□□□□□ -0.69
CLCN6-202ENST00000346436 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.74□□□□□ -0.69
CLCN6-202ENST00000346436 TRAF6Q9Y4K3 522 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms