RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 CEACAM20Q6UY09 585 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 FAM83HQ6ZRV2 1179 aaPredicted RBP13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 PRSS42Q7Z5A4 293 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 BMPERQ8N8U9 685 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 OR52K1Q8NGK4 314 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 ART4Q93070 314 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 WBP1Q96G27 269 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 C9orf72Q96LT7 481 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 HS3ST6Q96QI5 342 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 KCNK17Q96T54 332 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 ZNF768Q9H5H4 540 aaKnown RBP13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 OGFRQ9NZT2 677 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 COLEC10Q9Y6Z7 277 aa13.05□□□□□ -0.32
SIRPB3P-201ENST00000340424 MGAQ8IWI9 3026 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 CAPN5O15484 640 aaPredicted RBP13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 ZSCAN12O43309 604 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 SGTAO43765 313 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 CEP104O60308 925 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 PPARGP37231 505 aaPredicted RBP13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 NSG1P42857 185 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 PRSS12P56730 875 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 CDK16Q00536 496 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 SNAP47Q5SQN1 464 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 MANEAQ5SRI9 462 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 ARMC3Q5W041 872 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 AFTPHQ6ULP2 937 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 PACS1Q6VY07 963 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 CERS6Q6ZMG9 384 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 TAS2R42Q7RTR8 314 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 GSTA5Q7RTV2 222 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 SERPINA9Q86WD7 417 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 CARFQ8N187 725 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 SGSM3Q96HU1 749 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 NAP1L3Q99457 506 aaPredicted RBP13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 CD180Q99467 661 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 SLC24A3Q9HC58 644 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 CPNE5Q9HCH3 593 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 CASS4Q9NQ75 786 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 IMP3Q9NV31 184 aaKnown RBP13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 OCIAD1Q9NX40 245 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 PSMD13Q9UNM6 376 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 CACNA1GO43497 2377 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 AHCTF1Q8WYP5 2266 aa13.04□□□□□ -0.32
SIRPB3P-201ENST00000340424 EIF4E1BA6NMX2 242 aaKnown RBP13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 A8MU76 341 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 IFRD1O00458 451 aaPredicted RBP13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 CCL22O00626 93 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 POLR1CO15160 346 aaPredicted RBP13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 ATXN7O15265 892 aaPredicted RBP13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 TYRP1P17643 537 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 CD151P48509 253 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 GFERP55789 205 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 PLOD1Q02809 727 aaPredicted RBP13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 ACVR1Q04771 509 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 PLCL1Q15111 1095 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 SOWAHCQ53LP3 525 aaPredicted RBP13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 AARS2Q5JTZ9 985 aaKnown RBP13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 TSTD2Q5T7W7 516 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 ARHGAP40Q5TG30 622 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 CAPRIN2Q6IMN6 1127 aaKnown RBP13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 ZFAND4Q86XD8 727 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 CFAP206Q8IYR0 622 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 TAB3Q8N5C8 712 aaPredicted RBP13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 ZSCAN1Q8NBB4 408 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 PPHLN1Q8NEY8 458 aaKnown RBP13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 UBXN4Q92575 508 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 RSC1A1Q92681 617 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 PBKQ96KB5 322 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 C12orf66Q96MD2 445 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 TGM7Q96PF1 710 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 IL22Q9GZX6 179 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 WWP1Q9H0M0 922 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 TRIT1Q9H3H1 467 aaKnown RBP13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 FAM96AQ9H5X1 160 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 KIR3DX1Q9H7L2 352 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 COG4Q9H9E3 785 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 PIH1D1Q9NWS0 290 aaKnown RBP13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 KLHL3Q9UH77 587 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 TTC7AQ9ULT0 858 aaPredicted RBP13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 B3GALT1Q9Y5Z6 326 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 ATMQ13315 3056 aa13.03□□□□□ -0.32
SIRPB3P-201ENST00000340424 OR5K3A6NET4 321 aa13.02□□□□□ -0.33
SIRPB3P-201ENST00000340424 AGRPO00253 132 aa13.02□□□□□ -0.33
SIRPB3P-201ENST00000340424 MATN2O00339 956 aa13.02□□□□□ -0.33
SIRPB3P-201ENST00000340424 LIN7AO14910 233 aaPredicted RBP13.02□□□□□ -0.33
SIRPB3P-201ENST00000340424 RASSF9O75901 435 aa13.02□□□□□ -0.33
SIRPB3P-201ENST00000340424 FTH1P02794 183 aa13.02□□□□□ -0.33
SIRPB3P-201ENST00000340424 ETS1P14921 441 aa13.02□□□□□ -0.33
SIRPB3P-201ENST00000340424 FOXN2P32314 431 aa13.02□□□□□ -0.33
SIRPB3P-201ENST00000340424 RPL22P35268 128 aaKnown RBP13.02□□□□□ -0.33
SIRPB3P-201ENST00000340424 BASP1P80723 227 aaKnown RBP13.02□□□□□ -0.33
SIRPB3P-201ENST00000340424 KRT33BQ14525 404 aa13.02□□□□□ -0.33
SIRPB3P-201ENST00000340424 IL11RAQ14626 422 aa13.02□□□□□ -0.33
SIRPB3P-201ENST00000340424 DBN1Q16643 649 aa13.02□□□□□ -0.33
SIRPB3P-201ENST00000340424 CCDC38Q502W7 563 aa13.02□□□□□ -0.33
SIRPB3P-201ENST00000340424 ANKS6Q68DC2 871 aa13.02□□□□□ -0.33
SIRPB3P-201ENST00000340424 OOSP2Q86WS3 158 aa13.02□□□□□ -0.33
SIRPB3P-201ENST00000340424 KMT5CQ86Y97 462 aa13.02□□□□□ -0.33
SIRPB3P-201ENST00000340424 PIANPQ8IYJ0 282 aa13.02□□□□□ -0.33
SIRPB3P-201ENST00000340424 MYRIPQ8NFW9 859 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms