RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 KIF5AQ12840 1032 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 KLF1Q13351 362 aaPredicted RBP6.24□□□□□ -1.41
SMG1-201ENST00000330588 GALNT3Q14435 633 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 PRPSAP1Q14558 356 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 TAF1AQ15573 450 aaPredicted RBP6.24□□□□□ -1.41
SMG1-201ENST00000330588 COL28A1Q2UY09 1125 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 C3orf38Q5JPI3 329 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 LDLRAP1Q5SW96 308 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 IYDQ6PHW0 289 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 RANBP10Q6VN20 620 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 RFLNAQ6ZTI6 216 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 RAB11FIP2Q7L804 512 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 PID1Q7Z2X4 250 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 KIAA1328Q86T90 577 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 SLC9B2Q86UD5 537 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 LRRTM4Q86VH4 590 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 GAS2L3Q86XJ1 694 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 SPACA3Q8IXA5 215 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 CCDC112Q8NEF3 446 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 DDHD1Q8NEL9 900 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 SPATA22Q8NHS9 363 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 CCL4L1Q8NHW4 92 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 ACTL9Q8TC94 416 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 KCNE4Q8WWG9 221 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 KRT35Q92764 455 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 RTP4Q96DX8 246 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 ZNF514Q96K75 400 aaPredicted RBP6.24□□□□□ -1.41
SMG1-201ENST00000330588 SPATA13Q96N96 652 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 AGAP2Q99490 1192 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 SPATA16Q9BXB7 569 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 FSD1LQ9BXM9 530 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 CAAP1Q9H8G2 361 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 GOLGA6AQ9NYA3 693 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 SEPT10Q9P0V9 454 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 CD84Q9UIB8 345 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 MOSPD1Q9UJG1 213 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 SLC5A6Q9Y289 635 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 PKP3Q9Y446 797 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 HYOU1Q9Y4L1 999 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 PCDHGA3Q9Y5H0 932 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 ST14Q9Y5Y6 855 aa6.24□□□□□ -1.41
SMG1-201ENST00000330588 ZFC3H1O60293 1989 aaKnown RBP6.24□□□□□ -1.41
SMG1-201ENST00000330588 MAP1BP46821 2468 aaKnown RBP6.24□□□□□ -1.41
SMG1-201ENST00000330588 FAM221AA4D161 298 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 ERI2A8K979 691 aaKnown RBP6.23□□□□□ -1.41
SMG1-201ENST00000330588 AGAP14A8MT82 685 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 B4E171 279 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 H7C0C1 242 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 B4GAT1O43505 415 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 KRT86O43790 486 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 DUX1O43812 170 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 PMPCBO75439 489 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 ASMTLO95671 621 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 MPOP05164 745 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 GSTM1P09488 218 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 ANKRD34CP0C6C1 535 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 RBP3P10745 1247 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 MYF5P13349 255 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 ZNF7P17097 686 aaPredicted RBP6.23□□□□□ -1.41
SMG1-201ENST00000330588 VCLP18206 1134 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 PSMA3P25788 255 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 AK4P27144 223 aaPredicted RBP6.23□□□□□ -1.41
SMG1-201ENST00000330588 CD1CP29017 333 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 UGT1A5P35504 534 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 SPAM1P38567 509 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 TSPAN7P41732 249 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 ATP5OP48047 213 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 POLD2P49005 469 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 MAZP56270 477 aaKnown RBP6.23□□□□□ -1.41
SMG1-201ENST00000330588 EIF3EP60228 445 aaKnown RBP6.23□□□□□ -1.41
SMG1-201ENST00000330588 OTUD4Q01804 1114 aaKnown RBP6.23□□□□□ -1.41
SMG1-201ENST00000330588 RHDQ02161 417 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 HHEXQ03014 270 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 FOXD4Q12950 439 aaPredicted RBP6.23□□□□□ -1.41
SMG1-201ENST00000330588 PTPRRQ15256 657 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 P3H1Q32P28 736 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 SIRPB2Q5JXA9 342 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 ANKRD20A2Q5SQ80 823 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 ANKRD20A1Q5TYW2 823 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 ANKRD20A3Q5VUR7 823 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 ARMC3Q5W041 872 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 KAZNQ674X7 775 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 TMEM71Q6P5X7 295 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 SLC30A9Q6PML9 568 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 ABRAXAS1Q6UWZ7 409 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 PEX26Q7Z412 305 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 ADGRG6Q86SQ4 1221 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 ZC3H18Q86VM9 953 aaKnown RBP6.23□□□□□ -1.41
SMG1-201ENST00000330588 FBXO39Q8N4B4 442 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 GOLM1Q8NBJ4 401 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 OR10G6Q8NH81 332 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 FBXO27Q8NI29 283 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 HEXDCQ8WVB3 486 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 ZFPM2Q8WW38 1151 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 ALG3Q92685 438 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 OXNAD1Q96HP4 312 aaPredicted RBP6.23□□□□□ -1.41
SMG1-201ENST00000330588 HES6Q96HZ4 224 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 EAF1Q96JC9 268 aaPredicted RBP6.23□□□□□ -1.41
SMG1-201ENST00000330588 TEFMQ96QE5 360 aaKnown RBP6.23□□□□□ -1.41
SMG1-201ENST00000330588 ZPBPQ9BS86 351 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms