RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 NRP2O60462 931 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 CRCPO75575 148 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 BAG2O95816 211 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 CAPN1P07384 714 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 SRPRAP08240 638 aaKnown RBP6.43□□□□□ -1.38
USP47-201ENST00000305481 ATP1B2P14415 290 aaPredicted RBP6.43□□□□□ -1.38
USP47-201ENST00000305481 ZNF30P17039 623 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 CAPN3P20807 821 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 PSMD8P48556 350 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 CDC16Q13042 620 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 ARHGEF7Q14155 803 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 GRIN2CQ14957 1233 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 TAF11Q15544 211 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 DUSP6Q16828 381 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 VPS26BQ4G0F5 336 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 HENMT1Q5T8I9 393 aaKnown RBP6.43□□□□□ -1.38
USP47-201ENST00000305481 MIER2Q8N344 545 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 HBEGFQ99075 208 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 SLC39A3Q9BRY0 314 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 SLC25A23Q9BV35 468 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 RIOK2Q9BVS4 552 aaKnown RBP6.43□□□□□ -1.38
USP47-201ENST00000305481 CD244Q9BZW8 370 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 FAM83DQ9H4H8 585 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 IPPKQ9H8X2 491 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 PKD2L2Q9NZM6 624 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 DPP7Q9UHL4 492 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 ITM2BQ9Y287 266 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 TNPO3Q9Y5L0 923 aaKnown RBP6.43□□□□□ -1.38
USP47-201ENST00000305481 PLXNA2O75051 1894 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 KRT87PA6NCN2 255 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 VPS4BO75351 444 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 KATNA1O75449 491 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 MATN4O95460 622 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 ADH1CP00326 375 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 CBSLP0DN79 551 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 VCLP18206 1134 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 CBSP35520 551 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 NNMTP40261 264 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 DCDC1P59894 354 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 MAPRE2Q15555 327 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 KIF19Q2TAC6 998 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 LAYNQ6UX15 382 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 PARS2Q7L3T8 475 aaKnown RBP6.43□□□□□ -1.38
USP47-201ENST00000305481 TECPR1Q7Z6L1 1165 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 ADGRG6Q86SQ4 1221 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 DNAJC9Q8WXX5 260 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 JADE3Q92613 823 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 ULK4Q96C45 1275 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 NAF1Q96HR8 494 aaKnown RBP6.43□□□□□ -1.38
USP47-201ENST00000305481 SERPINI1Q99574 410 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 RDH14Q9HBH5 336 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 NDE1Q9NXR1 346 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 KLHL42Q9P2K6 505 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 DKK3Q9UBP4 350 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 ANGPTL2Q9UKU9 493 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 SUFUQ9UMX1 484 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 PDE10AQ9Y233 779 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 CCL27Q9Y4X3 112 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 CEP290O15078 2479 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 ASPDHA6ND91 283 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 PRORSD1PA6NEY8 169 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 EPOPA6NHQ4 379 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 NR5A2O00482 541 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 MRASO14807 208 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 MAP3K7O43318 606 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 CYP2A6P11509 494 aaPredicted RBP6.42□□□□□ -1.38
USP47-201ENST00000305481 HLA-EP13747 358 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 IDO1P14902 403 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 EPORP19235 508 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 TCN1P20061 433 aaPredicted RBP6.42□□□□□ -1.38
USP47-201ENST00000305481 ME2P23368 584 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 FCARP24071 287 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 MMP12P39900 470 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 STX1BP61266 288 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 HSPA14Q0VDF9 509 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 ABRAXAS2Q15018 415 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 ZRSR2Q15696 482 aaKnown RBP6.42□□□□□ -1.38
USP47-201ENST00000305481 MMEL1Q495T6 779 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 C6orf136Q5SQH8 315 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 SULT1C3Q6IMI6 304 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 BLOC1S3Q6QNY0 202 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 DPPA4Q7L190 304 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 ARMCX6Q7L4S7 300 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 SPATA19Q7Z5L4 167 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 SFRP1Q8N474 314 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 BEND7Q8N7W2 519 aaPredicted RBP6.42□□□□□ -1.38
USP47-201ENST00000305481 METTL6Q8TCB7 284 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 BPIFB1Q8TDL5 484 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 UBTD2Q8WUN7 234 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 SMARCD2Q92925 531 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 ANKRD27Q96NW4 1050 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 FAM83CQ9BQN1 747 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 GPATCH1Q9BRR8 931 aaKnown RBP6.42□□□□□ -1.38
USP47-201ENST00000305481 AIG1Q9NVV5 245 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 GMPR2Q9P2T1 348 aaKnown RBP6.42□□□□□ -1.38
USP47-201ENST00000305481 CD300AQ9UGN4 299 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 TMEM202A6NGA9 273 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 NUAK1O60285 661 aa6.42□□□□□ -1.38
USP47-201ENST00000305481 BCAS2O75934 225 aaPredicted RBP6.42□□□□□ -1.38
USP47-201ENST00000305481 S100BP04271 92 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms