RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 GINS4Q9BRT9 223 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 SRMSQ9H3Y6 488 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 ARL5AQ9Y689 179 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 FADS2P1A8MWK0 482 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 RGS8P57771 180 aaPredicted RBP18.71■□□□□ 0.59
PTPRE-201ENST00000254667 GJA9P57773 515 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 MYBPC1Q00872 1141 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 KCTD19Q17RG1 926 aaPredicted RBP18.71■□□□□ 0.59
PTPRE-201ENST00000254667 HDDC3Q8N4P3 179 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 FLCNQ8NFG4 579 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 SLC9A6Q92581 669 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 IL12RB2Q99665 862 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 DPEP2Q9H4A9 486 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 IL36AQ9UHA7 158 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 AK5Q9Y6K8 562 aa18.71■□□□□ 0.59
PTPRE-201ENST00000254667 ROBO1Q9Y6N7 1651 aa18.71■□□□□ 0.58
PTPRE-201ENST00000254667 TNFRSF11BO00300 401 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 DBTP11182 482 aaKnown RBP18.7■□□□□ 0.58
PTPRE-201ENST00000254667 ADARP55265 1226 aaKnown RBP18.7■□□□□ 0.58
PTPRE-201ENST00000254667 GPR17Q13304 367 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 VWA5B1Q5TIE3 1220 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 UBR7Q8N806 425 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 ZNF354BQ96LW1 612 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 ITM2CQ9NQX7 267 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 MAGEB17A8MXT2 336 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 GSTT1P30711 240 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 RPS14P62263 151 aaKnown RBP18.7■□□□□ 0.58
PTPRE-201ENST00000254667 SLC39A4Q6P5W5 647 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 TRMT10BQ6PF06 316 aaKnown RBP18.7■□□□□ 0.58
PTPRE-201ENST00000254667 OLFML1Q6UWY5 402 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 ISLR2Q6UXK2 745 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 FAM47BQ8NA70 645 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 DCAKDQ8WVC6 231 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 SLC22A18Q96BI1 424 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 GMLQ99445 158 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 RAB26Q9ULW5 256 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 NDRG2Q9UN36 371 aaKnown RBP18.7■□□□□ 0.58
PTPRE-201ENST00000254667 MAP4K5Q9Y4K4 846 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 TRBV23OR9-2A0A075B6M9 112 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 SNPHO15079 494 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 CHRNGP07510 517 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 NDUFS1P28331 727 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 MLLT6P55198 1093 aaPredicted RBP18.7■□□□□ 0.58
PTPRE-201ENST00000254667 MED22Q15528 200 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 MBLAC2Q68D91 279 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 TMPRSS11AQ6ZMR5 421 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 CELF5Q8N6W0 485 aaKnown RBP18.7■□□□□ 0.58
PTPRE-201ENST00000254667 PNPT1Q8TCS8 783 aaKnown RBP18.7■□□□□ 0.58
PTPRE-201ENST00000254667 CLPTM1LQ96KA5 538 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 PLK4O00444 970 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 TBX18O95935 607 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 ALPPL2P10696 532 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 MAGEA11P43364 429 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 FITM2Q8N6M3 262 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 ARL10Q8N8L6 244 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 TRIM63Q969Q1 353 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 ZSCAN5AQ9BUG6 496 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 C2orf71A6NGG8 1288 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 MPZL2O60487 215 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 CYP4B1P13584 511 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 FSHRP23945 695 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 RGS21Q2M5E4 152 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 XKR4Q5GH76 650 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 ZDHHC24Q6UX98 284 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 THAP5Q7Z6K1 395 aa18.7■□□□□ 0.58
PTPRE-201ENST00000254667 RBM18Q96H35 190 aaKnown RBP18.7■□□□□ 0.58
PTPRE-201ENST00000254667 SLC31A1O15431 190 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 CHST10O43529 356 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 DCST1Q5T197 706 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 C12orf65Q9H3J6 166 aaKnown RBP18.69■□□□□ 0.58
PTPRE-201ENST00000254667 ZNF282Q9UDV7 671 aaPredicted RBP18.69■□□□□ 0.58
PTPRE-201ENST00000254667 CYP4F3Q08477 520 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 ITGADQ13349 1161 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 PAFAH1B3Q15102 231 aaKnown RBP18.69■□□□□ 0.58
PTPRE-201ENST00000254667 ZBTB6Q15916 424 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 SLC30A8Q8IWU4 369 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 SVOPLQ8N434 492 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 SLC38A3Q99624 504 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 OR2AG1Q9H205 316 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 NALCNQ8IZF0 1738 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 ABLIM1O14639 778 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 TFPIP10646 304 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 IMPDH1P20839 514 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 DNAJB1P25685 340 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 CHRNA4P43681 627 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 HERVK_113P63132 956 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 RINLQ6ZS11 566 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 OR2AP1Q8NGE2 309 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 CENPNQ96H22 339 aaPredicted RBP18.69■□□□□ 0.58
PTPRE-201ENST00000254667 C12orf66Q96MD2 445 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 ERVK-6Q9BXR3 956 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 ZDHHC18Q9NUE0 388 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 U3KQV3 271 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 ADH5P11766 374 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 JAZF1Q86VZ6 243 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 NATD1Q8N6N6 113 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 ELOVL2Q9NXB9 296 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 HS3ST4Q9Y661 456 aa18.69■□□□□ 0.58
PTPRE-201ENST00000254667 ZNF460Q14592 562 aa18.68■□□□□ 0.58
PTPRE-201ENST00000254667 DCBLD1Q8N8Z6 715 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms