RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 FBXL18Q96ME1 805 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 CRTAC1Q9NQ79 661 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 GDAP2Q9NXN4 497 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 MRPL39Q9NYK5 338 aaKnown RBP18.2■□□□□ 0.5
CLIP2-201ENST00000223398 GSTK1Q9Y2Q3 226 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 GIMD1P0DJR0 217 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 GCNT6Q5T4J0 391 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 Q96MT0 163 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 KCNK6Q9Y257 313 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 A0A0J9YVX5 310 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 A0A1B0GW55 424 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 IQCF3P0C7M6 154 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 DUX4L2P0CJ85 424 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 DUX4L3P0CJ86 424 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 DUX4L4P0CJ87 422 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 DUX4L5P0CJ88 424 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 DUX4L6P0CJ89 424 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 DUX4L7P0CJ90 424 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 UROSP10746 265 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 GNAZP19086 355 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 RGS8P57771 180 aaPredicted RBP18.2■□□□□ 0.5
CLIP2-201ENST00000223398 TTC23Q5W5X9 447 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 SPOCK2Q92563 424 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 RACGAP1Q9H0H5 632 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 PNO1Q9NRX1 252 aaKnown RBP18.2■□□□□ 0.5
CLIP2-201ENST00000223398 DUX4Q9UBX2 424 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 OGNP20774 298 aaKnown RBP18.2■□□□□ 0.5
CLIP2-201ENST00000223398 MLLT3P42568 568 aaPredicted RBP18.2■□□□□ 0.5
CLIP2-201ENST00000223398 YAP1P46937 504 aaKnown RBP18.2■□□□□ 0.5
CLIP2-201ENST00000223398 FAM91A1Q658Y4 838 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 C7orf43Q8WVR3 580 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 SGIP1Q9BQI5 828 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 GPR62Q9BZJ7 368 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 ARHGEF3Q9NR81 526 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 CNTN5O94779 1100 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 RHOP08100 348 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 CASP9P55211 416 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 ADGRD1Q6QNK2 874 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 CYP2U1Q7Z449 544 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 SPPL2CQ8IUH8 684 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 OR52J3Q8NH60 311 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 SLC35F5Q8WV83 523 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 SMOC2Q9H3U7 446 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 PIP5K1BO14986 540 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 VARSP26640 1264 aaKnown RBP18.19■□□□□ 0.5
CLIP2-201ENST00000223398 KLF10Q13118 480 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 ULK2Q8IYT8 1036 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 CDK15Q96Q40 435 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 MTRRQ9UBK8 725 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 KNDC1Q76NI1 1749 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 PI15O43692 258 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 MGRN1O60291 552 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 ITGA1P56199 1179 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 ELF3P78545 371 aaPredicted RBP18.19■□□□□ 0.5
CLIP2-201ENST00000223398 HYAL2Q12891 473 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 MS4A13Q5J8X5 152 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 PTCHD4Q6ZW05 846 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 GALNT5Q7Z7M9 940 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 ADGRG6Q86SQ4 1221 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 ZCCHC7Q8N3Z6 543 aaKnown RBP18.19■□□□□ 0.5
CLIP2-201ENST00000223398 NEK7Q8TDX7 302 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 ZNF184Q99676 751 aaPredicted RBP18.19■□□□□ 0.5
CLIP2-201ENST00000223398 NKX2-4Q9H2Z4 354 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 ABI3Q9P2A4 366 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 RHAGQ02094 409 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 FAM110BQ8TC76 370 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 PCBD2Q9H0N5 130 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 HCN3Q9P1Z3 774 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 MFHAS1Q9Y4C4 1052 aa18.19■□□□□ 0.5
CLIP2-201ENST00000223398 MED26O95402 600 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 OC90Q02509 493 aaPredicted RBP18.18■□□□□ 0.5
CLIP2-201ENST00000223398 LGALS3BPQ08380 585 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 ITPRIPL2Q3MIP1 535 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 TCEAL5Q5H9L2 206 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 SERINC5Q86VE9 423 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 PROSER1Q86XN7 944 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 TEFMQ96QE5 360 aaKnown RBP18.18■□□□□ 0.5
CLIP2-201ENST00000223398 INTS10Q9NVR2 710 aaKnown RBP18.18■□□□□ 0.5
CLIP2-201ENST00000223398 VIPR1P32241 457 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 ARCN1P48444 511 aaKnown RBP18.18■□□□□ 0.5
CLIP2-201ENST00000223398 IRF9Q00978 393 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 GLYATQ6IB77 296 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 BRAT1Q6PJG6 821 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 JAZF1Q86VZ6 243 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 ARL8BQ9NVJ2 186 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 SIX4Q9UIU6 781 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 ERGIC3Q9Y282 383 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 TPST2O60704 377 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 RFTN2Q52LD8 501 aaPredicted RBP18.18■□□□□ 0.5
CLIP2-201ENST00000223398 KIAA0930Q6ICG6 404 aaPredicted RBP18.18■□□□□ 0.5
CLIP2-201ENST00000223398 SLC8B1Q6J4K2 584 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 PAQR3Q6TCH7 311 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 DEPDC4Q8N2C3 294 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 ZMAT2Q96NC0 199 aaKnown RBP18.18■□□□□ 0.5
CLIP2-201ENST00000223398 NEK6Q9HC98 313 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 ZDHHC3Q9NYG2 299 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 NELFEP18615 380 aaKnown RBP18.18■□□□□ 0.5
CLIP2-201ENST00000223398 RFX4Q33E94 735 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 SLC39A5Q6ZMH5 540 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 LRRTM4Q86VH4 590 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms