RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 TDP1Q9NUW8 608 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 RBM47A0AV96 593 aaKnown RBP18.7■□□□□ 0.58
SMPD3-201ENST00000219334 ELOVL7A1L3X0 281 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 SERPINA1P01009 418 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 GJA1P17302 382 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 APLP1P51693 650 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 FBXO48Q5FWF7 155 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 SLC34A3Q8N130 599 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 FAM192AQ9GZU8 254 aa18.7■□□□□ 0.58
SMPD3-201ENST00000219334 INPPL1O15357 1258 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 OR4F21O95013 312 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 MNDAP41218 407 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 ELF3P78545 371 aaPredicted RBP18.69■□□□□ 0.58
SMPD3-201ENST00000219334 KLF10Q13118 480 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 MYBPC3Q14896 1274 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 DCST1Q5T197 706 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 ZNF776Q68DI1 518 aaPredicted RBP18.69■□□□□ 0.58
SMPD3-201ENST00000219334 RASGRP3Q8IV61 690 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 NPLOC4Q8TAT6 608 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 NTAN1Q96AB6 310 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 EDDM13A0A1B0GTR0 161 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 PRR5-ARHGAP8B1AHC4 643 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 ARHGAP8P85298 464 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 PIK3R6Q5UE93 754 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 FAM46DQ8NEK8 389 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 PIGUQ9H490 435 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 NOL6Q9H6R4 1146 aaKnown RBP18.69■□□□□ 0.58
SMPD3-201ENST00000219334 ZNF180Q9UJW8 692 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 NR2E1Q9Y466 385 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 GABRDO14764 452 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 FSTL1Q12841 308 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 RALGPS2Q86X27 583 aaPredicted RBP18.69■□□□□ 0.58
SMPD3-201ENST00000219334 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.69■□□□□ 0.58
SMPD3-201ENST00000219334 AGAP2Q99490 1192 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 IGSF9Q9P2J2 1179 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 FAM163BP0C2L3 166 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 ATP5A1P25705 553 aaKnown RBP18.69■□□□□ 0.58
SMPD3-201ENST00000219334 LSM3P62310 102 aaKnown RBP18.69■□□□□ 0.58
SMPD3-201ENST00000219334 ZCCHC12Q6PEW1 402 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 BRAT1Q6PJG6 821 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 NUP54Q7Z3B4 507 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 RNF31Q96EP0 1072 aa18.69■□□□□ 0.58
SMPD3-201ENST00000219334 EIF2B4Q9UI10 523 aaKnown RBP18.69■□□□□ 0.58
SMPD3-201ENST00000219334 RUVBL1Q9Y265 456 aaKnown RBP18.69■□□□□ 0.58
SMPD3-201ENST00000219334 UGT2B11O75310 529 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 SEC24AO95486 1093 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 ANPEPP15144 967 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 JAM2P57087 298 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 UAP1L1Q3KQV9 507 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 PYDC2Q56P42 97 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 CLEC6AQ6EIG7 209 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 SPOCK2Q92563 424 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 FCRL4Q96PJ5 515 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 ZNF304Q9HCX3 659 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 FADS2P1A8MWK0 482 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 MAP2K7O14733 419 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 NOL4O94818 638 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 CLCN7P51798 805 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 NRG3P56975 720 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 SEMG2Q02383 582 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 ITGADQ13349 1161 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 HGSNATQ68CP4 663 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 FBXO42Q6P3S6 717 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 HPS6Q86YV9 775 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 SPATA9Q9BWV2 254 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 PDP1Q9P0J1 537 aaPredicted RBP18.68■□□□□ 0.58
SMPD3-201ENST00000219334 A0A1W2PQ45 241 aaPredicted RBP18.68■□□□□ 0.58
SMPD3-201ENST00000219334 A0A1W2PQY0 241 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 FABP3P05413 133 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 TGFBR2P37173 567 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 ARL13AQ5H913 290 aaPredicted RBP18.68■□□□□ 0.58
SMPD3-201ENST00000219334 KIAA0930Q6ICG6 404 aaPredicted RBP18.68■□□□□ 0.58
SMPD3-201ENST00000219334 PCDH19Q8TAB3 1148 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 PIGXQ8TBF5 258 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 CLEC4CQ8WTT0 213 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 SMPDL3BQ92485 455 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 EFHD2Q96C19 240 aaPredicted RBP18.68■□□□□ 0.58
SMPD3-201ENST00000219334 ZBED6CLQ96FA7 236 aaPredicted RBP18.68■□□□□ 0.58
SMPD3-201ENST00000219334 EBPLQ9BY08 206 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 PLGRKTQ9HBL7 147 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 EIF2B3Q9NR50 452 aaKnown RBP18.68■□□□□ 0.58
SMPD3-201ENST00000219334 POLE3Q9NRF9 147 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 FBXL12Q9NXK8 326 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 RB1P06400 928 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 PHF19Q5T6S3 580 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 FSTL4Q6MZW2 842 aa18.68■□□□□ 0.58
SMPD3-201ENST00000219334 ATRNL1Q5VV63 1379 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 TNFRSF11BO00300 401 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 PRKD1Q15139 912 aaPredicted RBP18.67■□□□□ 0.58
SMPD3-201ENST00000219334 SLC8B1Q6J4K2 584 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 FUKQ8N0W3 1084 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 RIOK2Q9BVS4 552 aaKnown RBP18.67■□□□□ 0.58
SMPD3-201ENST00000219334 CCSER2Q9H7U1 834 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 PNPLA3Q9NST1 481 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 PDPK1O15530 556 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 FGF18O76093 207 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 MLLT3P42568 568 aaPredicted RBP18.67■□□□□ 0.58
SMPD3-201ENST00000219334 GRK6P43250 576 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 LIX1Q8N485 282 aa18.67■□□□□ 0.58
SMPD3-201ENST00000219334 CYB5D2Q8WUJ1 264 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms