RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	BNIPL	Q7Z465	357 aa		14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	GATAD2A	Q86YP4	633 aa		14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	KBTBD7	Q8WVZ9	684 aa		14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	KLHL4	Q9C0H6	718 aa		14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	EQTN	Q9NQ60	294 aa		14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	SLCO3A1	Q9UIG8	710 aa		14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	TMEM59L	Q9UK28	342 aa		14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	PCDHB1	Q9Y5F3	818 aa		14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	RFXANK	O14593	260 aa		14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	BIRC5	O15392	142 aa		14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	MT-ND1	P03886	318 aa		14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	UMPS	P11172	480 aa		14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	JUP	P14923	745 aa		14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	RPL10	P27635	214 aa	Known RBP	14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	IDH2	P48735	452 aa	Known RBP	14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	ZCCHC8	Q6NZY4	707 aa	Known RBP	14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	C15orf39	Q6ZRI6	1047 aa		14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	ZC3H3	Q8IXZ2	948 aa	Known RBP	14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	PNPLA1	Q8N8W4	532 aa		14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	USP7	Q93009	1102 aa		14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	CASD1	Q96PB1	797 aa		14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	MTERF1	Q99551	399 aa	Known RBP	14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	MCMBP	Q9BTE3	642 aa		14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	HCFC1R1	Q9NWW0	138 aa		14.15	□□□□□ -0.14
NEDD4L-238	ENST00000635997	CLOCK	O15516	846 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	VPS4B	O75351	444 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	KRT36	O76013	467 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	CAPN1	P07384	714 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	CHRNG	P07510	517 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	ACP5	P13686	325 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	ALAS2	P22557	587 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	TLX1	P31314	330 aa	Predicted RBP	14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	MARCH8	Q5T0T0	291 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	PIM3	Q86V86	326 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	ANKRD46	Q86W74	232 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	C3orf58	Q8NDZ4	430 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	FOXJ1	Q92949	421 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	UBE2E3	Q969T4	207 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	BDH2	Q9BUT1	245 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	RIOK2	Q9BVS4	552 aa	Known RBP	14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	RIBC2	Q9H4K1	309 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	SIN3B	O75182	1162 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	KCNH1	O95259	989 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	VAV1	P15498	845 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	NTS	P30990	170 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	ACTR1B	P42025	376 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	ACTR1A	P61163	376 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	USP46	P62068	366 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	CHRNA6	Q15825	494 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	LRRC74B	Q6ZQY2	392 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	KIAA0408	Q6ZU52	694 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	RALGPS2	Q86X27	583 aa	Predicted RBP	14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	MAGEE2	Q8TD90	523 aa	Predicted RBP	14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	RERG	Q96A58	199 aa	Predicted RBP	14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	TBC1D17	Q9HA65	648 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	OR10H1	Q9Y4A9	318 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997		U3KQV3	271 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	MYH1	P12882	1939 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	CLC	Q05315	142 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	RALGDS	Q12967	914 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	UBXN11	Q5T124	520 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	IL23R	Q5VWK5	629 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997		Q6ZVL8	140 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	ADCK1	Q86TW2	530 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	GALNT15	Q8N3T1	639 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	GSTCD	Q8NEC7	633 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	OSCP1	Q8WVF1	389 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	IGSF8	Q969P0	613 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	QRFPR	Q96P65	431 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	CDK15	Q96Q40	435 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	DNAJC11	Q9NVH1	559 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	MYO5A	Q9Y4I1	1855 aa	Known RBP	14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	KRT87P	A6NCN2	255 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	ANKRD66	B4E2M5	251 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	KHNYN	O15037	678 aa	Known RBP	14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	RGS5	O15539	181 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	TRPC1	P48995	793 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	CCR3	P51677	355 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	SLC34A1	Q06495	639 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	CYP4Z1	Q86W10	505 aa		14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	BEND7	Q8N7W2	519 aa	Predicted RBP	14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	LEF1	Q9UJU2	399 aa	Predicted RBP	14.14	□□□□□ -0.15
NEDD4L-238	ENST00000635997	TIAM2	Q8IVF5	1701 aa		14.13	□□□□□ -0.15
NEDD4L-238	ENST00000635997	MMP20	O60882	483 aa		14.13	□□□□□ -0.15
NEDD4L-238	ENST00000635997	VPS26B	Q4G0F5	336 aa		14.13	□□□□□ -0.15
NEDD4L-238	ENST00000635997	RBM20	Q5T481	1227 aa	Known RBP	14.13	□□□□□ -0.15
NEDD4L-238	ENST00000635997	SPESP1	Q6UW49	350 aa		14.13	□□□□□ -0.15
NEDD4L-238	ENST00000635997	GDPD4	Q6W3E5	623 aa		14.13	□□□□□ -0.15
NEDD4L-238	ENST00000635997	RPS27L	Q71UM5	84 aa	Known RBP	14.13	□□□□□ -0.15
NEDD4L-238	ENST00000635997	PROX1	Q92786	737 aa		14.13	□□□□□ -0.15
NEDD4L-238	ENST00000635997	SLC38A3	Q99624	504 aa		14.13	□□□□□ -0.15
NEDD4L-238	ENST00000635997	SLC2A4RG	Q9NR83	387 aa		14.13	□□□□□ -0.15
NEDD4L-238	ENST00000635997		A0A088AWK7	358 aa		14.13	□□□□□ -0.15
NEDD4L-238	ENST00000635997	AHSG	P02765	367 aa		14.13	□□□□□ -0.15
NEDD4L-238	ENST00000635997	NR2F1	P10589	423 aa		14.13	□□□□□ -0.15
NEDD4L-238	ENST00000635997	ZNF10	P21506	573 aa	Predicted RBP	14.13	□□□□□ -0.15
NEDD4L-238	ENST00000635997	SCNN1A	P37088	669 aa		14.13	□□□□□ -0.15
NEDD4L-238	ENST00000635997	GRIA2	P42262	883 aa		14.13	□□□□□ -0.15
NEDD4L-238	ENST00000635997	PLA2G16	P53816	162 aa		14.13	□□□□□ -0.15
NEDD4L-238	ENST00000635997	ADAR	P55265	1226 aa	Known RBP	14.13	□□□□□ -0.15

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