RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 IGSF6O95976 241 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 IDO1P14902 403 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 BPIP17213 487 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 HOXB8P17481 243 aaPredicted RBP11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 PBLDP30039 288 aaPredicted RBP11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 OXTRP30559 389 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 SLC26A3P40879 764 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 NEK2P51955 445 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 GTF2H2Q13888 395 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 ABRAXAS2Q15018 415 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 GTF2H2CQ6P1K8 395 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 CHST9Q7L1S5 443 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 GOLGA7Q7Z5G4 137 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 SLC22A15Q8IZD6 547 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 BEND7Q8N7W2 519 aaPredicted RBP11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 ITFG2Q969R8 447 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 TCEAL4Q96EI5 215 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 ATP13A3Q9H7F0 1226 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 RIC8BQ9NVN3 520 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 CMTM6Q9NX76 183 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 ARL15Q9NXU5 204 aa11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 OAS3Q9Y6K5 1087 aaKnown RBP11.37□□□□□ -0.59
ARHGEF1-220ENST00000600274 DHRS12A0PJE2 317 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 SLC22A2O15244 555 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 SEC22BO75396 215 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 MLYCDO95822 493 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 TSPAN12O95859 305 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 ESR1P03372 595 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 GSNP06396 782 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 UROSP10746 265 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 EFNA1P20827 205 aaPredicted RBP11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 SERPINA4P29622 427 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 GRIA2P42262 883 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 POLR2JP52435 117 aaKnown RBP11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 INHBCP55103 352 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 NTHL1P78549 312 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 LIPEQ05469 1076 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 NFATC2Q13469 925 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 CRY1Q16526 586 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 LRRC66Q68CR7 880 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 ADGRG6Q86SQ4 1221 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 ZSWIM9Q86XI8 627 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 TMEM25Q86YD3 366 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 CBR4Q8N4T8 237 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 DLG3Q92796 817 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 SCAMP4Q969E2 229 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 RNF145Q96MT1 663 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 BBS2Q9BXC9 721 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 ATG10Q9H0Y0 220 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 ACTR8Q9H981 624 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 RMI1Q9H9A7 625 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 ZDHHC4Q9NPG8 344 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 OPTCQ9UBM4 332 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 THSD7BQ9C0I4 1608 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 OR2AG2A6NM03 316 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 RAD51BO15315 384 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 ABLIM3O94929 683 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 HSPA1AP0DMV8 641 aaKnown RBP11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 HSPA1BP0DMV9 641 aaKnown RBP11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 FUT4P22083 530 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 ITPKAP23677 461 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 RHDQ02161 417 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 C6orf136Q5SQH8 315 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 ANKRD46Q86W74 232 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 SLC39A11Q8N1S5 342 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 KCNJ9Q92806 393 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 NCLNQ969V3 563 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 ASB2Q96Q27 587 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 CHCHD3Q9NX63 227 aaKnown RBP11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 RNF11Q9Y3C5 154 aa11.36□□□□□ -0.59
ARHGEF1-220ENST00000600274 MAGEB3O15480 346 aa11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 IL10P22301 178 aa11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 XPAP23025 273 aaPredicted RBP11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 PSMA4P25789 261 aaKnown RBP11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 ITGB8P26012 769 aa11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 HMGCLP35914 325 aa11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 CDH15P55291 814 aa11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 XIAPP98170 497 aa11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 PLEKHG6Q3KR16 790 aa11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 ZIK1Q3SY52 487 aaPredicted RBP11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 NADK2Q4G0N4 442 aa11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 RFTN2Q52LD8 501 aaPredicted RBP11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 RBM23Q86U06 439 aaKnown RBP11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 ITIH5Q86UX2 942 aa11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 OFCC1Q8IZS5 231 aa11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 RBFAQ8N0V3 343 aa11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 ELMOD1Q8N336 334 aa11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 CHST14Q8NCH0 376 aa11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 GPR26Q8NDV2 337 aa11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 OR2T34Q8NGX1 318 aa11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 OR2T3Q8NH03 318 aa11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 PIH1D2Q8WWB5 315 aa11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 FIG4Q92562 907 aa11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 PAWRQ96IZ0 340 aaKnown RBP11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 ZFRQ96KR1 1074 aaKnown RBP11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 FAM126AQ9BYI3 521 aaPredicted RBP11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 LINC00597Q9H2U6 94 aa11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 ALG2Q9H553 416 aa11.35□□□□□ -0.59
ARHGEF1-220ENST00000600274 SUCOQ9UBS9 1254 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms