RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 PIH1D1Q9NWS0 290 aaKnown RBP13.87□□□□□ -0.19
LIG1-218ENST00000599322 SLC39A1Q9NY26 324 aa13.87□□□□□ -0.19
LIG1-218ENST00000599322 SMARCAL1Q9NZC9 954 aa13.87□□□□□ -0.19
LIG1-218ENST00000599322 BFARQ9NZS9 450 aa13.87□□□□□ -0.19
LIG1-218ENST00000599322 ZNF624Q9P2J8 865 aaPredicted RBP13.87□□□□□ -0.19
LIG1-218ENST00000599322 FAM8A1Q9UBU6 413 aa13.87□□□□□ -0.19
LIG1-218ENST00000599322 KLHL3Q9UH77 587 aa13.87□□□□□ -0.19
LIG1-218ENST00000599322 PSMD13Q9UNM6 376 aa13.87□□□□□ -0.19
LIG1-218ENST00000599322 KIF26BQ2KJY2 2108 aa13.87□□□□□ -0.19
LIG1-218ENST00000599322 GOLGA6L10A0A0M3HER8 536 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 C17orf113A0A1B0GUU1 675 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 OR52A4PA6NMU1 304 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 EFCAB7A8K855 629 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 AGAP14A8MT82 685 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 GAPDHSO14556 408 aaPredicted RBP13.86□□□□□ -0.19
LIG1-218ENST00000599322 GPR39O43194 453 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 RASSF9O75901 435 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 AP2A2O94973 939 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 POLBP06746 335 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 TYRP1P17643 537 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 ITIH1P19827 911 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 RPL22P35268 128 aaKnown RBP13.86□□□□□ -0.19
LIG1-218ENST00000599322 NSG1P42857 185 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 NPY2RP49146 381 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 ATP1A2P50993 1020 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 CXADRP78310 365 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 CDK16Q00536 496 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 NFE2L1Q14494 772 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 ITIH4Q14624 930 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 FASTKD1Q53R41 847 aaKnown RBP13.86□□□□□ -0.19
LIG1-218ENST00000599322 AARS2Q5JTZ9 985 aaKnown RBP13.86□□□□□ -0.19
LIG1-218ENST00000599322 AFTPHQ6ULP2 937 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 CERS6Q6ZMG9 384 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 ZNF574Q6ZN55 896 aaPredicted RBP13.86□□□□□ -0.19
LIG1-218ENST00000599322 CCDC81Q6ZN84 652 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 C11orf96Q7Z7L8 435 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 ZSCAN1Q8NBB4 408 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 OR6P1Q8NGX9 317 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 HM13Q8TCT9 377 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 PEX13Q92968 403 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 LINC00615Q96LM1 132 aaPredicted RBP13.86□□□□□ -0.19
LIG1-218ENST00000599322 C12orf66Q96MD2 445 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 FCRL3Q96P31 734 aaPredicted RBP13.86□□□□□ -0.19
LIG1-218ENST00000599322 TEFMQ96QE5 360 aaKnown RBP13.86□□□□□ -0.19
LIG1-218ENST00000599322 RANBP9Q96S59 729 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 ZPBPQ9BS86 351 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 SLC40A1Q9NP59 571 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 EIF2B3Q9NR50 452 aaKnown RBP13.86□□□□□ -0.19
LIG1-218ENST00000599322 SCHIP1Q9P0W5 487 aaPredicted RBP13.86□□□□□ -0.19
LIG1-218ENST00000599322 RIMKLBQ9ULI2 386 aa13.86□□□□□ -0.19
LIG1-218ENST00000599322 A0A1W2PNU3 283 aaPredicted RBP13.85□□□□□ -0.19
LIG1-218ENST00000599322 B4E171 279 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 CCL22O00626 93 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 PFDN6O15212 129 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 TOX3O15405 576 aaPredicted RBP13.85□□□□□ -0.19
LIG1-218ENST00000599322 MAP3K7O43318 606 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 FTH1P02794 183 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 PRB1P04280 392 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 OR56A5P0C7T3 313 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 LIPCP11150 499 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 ETS1P14921 441 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 ACRV1P26436 265 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 CSF2RBP32927 897 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 TSPAN7P41732 249 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 PRLHRP49683 370 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 ARL4DP49703 201 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 PLOD1Q02809 727 aaPredicted RBP13.85□□□□□ -0.19
LIG1-218ENST00000599322 MSLNQ13421 630 aaPredicted RBP13.85□□□□□ -0.19
LIG1-218ENST00000599322 GPR18Q14330 331 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 CLCA4Q14CN2 919 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 RPE65Q16518 533 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 CCDC38Q502W7 563 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 PCID2Q5JVF3 399 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 MANEAQ5SRI9 462 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 CEACAM20Q6UY09 585 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 TMPRSS9Q7Z410 1059 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 MAGOHBQ96A72 148 aaKnown RBP13.85□□□□□ -0.19
LIG1-218ENST00000599322 TGM7Q96PF1 710 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 UBL7Q96S82 380 aaPredicted RBP13.85□□□□□ -0.19
LIG1-218ENST00000599322 CCNL2Q96S94 520 aaPredicted RBP13.85□□□□□ -0.19
LIG1-218ENST00000599322 WWP1Q9H0M0 922 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 CASS4Q9NQ75 786 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 PDP2Q9P2J9 529 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 ACSL6Q9UKU0 697 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 MGAQ8IWI9 3026 aa13.85□□□□□ -0.19
LIG1-218ENST00000599322 ZFC3H1O60293 1989 aaKnown RBP13.84□□□□□ -0.19
LIG1-218ENST00000599322 PRAMEF33A0A0G2JMD5 474 aa13.84□□□□□ -0.19
LIG1-218ENST00000599322 TEX51A0A1B0GUA7 166 aa13.84□□□□□ -0.19
LIG1-218ENST00000599322 CCDC78A2IDD5 438 aa13.84□□□□□ -0.19
LIG1-218ENST00000599322 MROH6A6NGR9 719 aa13.84□□□□□ -0.19
LIG1-218ENST00000599322 STMND1H3BQB6 276 aa13.84□□□□□ -0.19
LIG1-218ENST00000599322 PGRMC1O00264 195 aaKnown RBP13.84□□□□□ -0.19
LIG1-218ENST00000599322 CAPN5O15484 640 aaPredicted RBP13.84□□□□□ -0.19
LIG1-218ENST00000599322 KDM1AO60341 852 aa13.84□□□□□ -0.19
LIG1-218ENST00000599322 PRAMEF10O60809 474 aa13.84□□□□□ -0.19
LIG1-218ENST00000599322 MTHFD1P11586 935 aaKnown RBP13.84□□□□□ -0.19
LIG1-218ENST00000599322 CCL4P13236 92 aa13.84□□□□□ -0.19
LIG1-218ENST00000599322 BRAFP15056 766 aa13.84□□□□□ -0.19
LIG1-218ENST00000599322 KCNJ1P48048 391 aa13.84□□□□□ -0.19
LIG1-218ENST00000599322 SESN2P58004 480 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms