RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 WWP1Q9H0M0 922 aa10.88□□□□□ -0.67
LIG1-211ENST00000596457 MRM3Q9HC36 420 aaKnown RBP10.88□□□□□ -0.67
LIG1-211ENST00000596457 MARCH4Q9P2E8 410 aaPredicted RBP10.88□□□□□ -0.67
LIG1-211ENST00000596457 DKK4Q9UBT3 224 aa10.88□□□□□ -0.67
LIG1-211ENST00000596457 WDR37Q9Y2I8 494 aa10.88□□□□□ -0.67
LIG1-211ENST00000596457 CFAP20Q9Y6A4 193 aaKnown RBP10.88□□□□□ -0.67
LIG1-211ENST00000596457 RPS6KL1Q9Y6S9 549 aa10.88□□□□□ -0.67
LIG1-211ENST00000596457 IGLV3-16A0A075B6K0 115 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 KIR2DS5A0A0G2JLQ3 304 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 A0A0G2JNG1 304 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 A0A1W2PQM1 296 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 MAGEB16A2A368 324 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 FAM187AA6NFU0 413 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 KIR2DS3K7RE56 304 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 TAF4O00268 1085 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 ZW10O43264 779 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 F7P08709 466 aaPredicted RBP10.87□□□□□ -0.67
LIG1-211ENST00000596457 OR56A5P0C7T3 313 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 PNLIPP16233 465 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 SLC19A1P41440 591 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 RPL21P46778 160 aaKnown RBP10.87□□□□□ -0.67
LIG1-211ENST00000596457 PRLHRP49683 370 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 THOC5Q13769 683 aaKnown RBP10.87□□□□□ -0.67
LIG1-211ENST00000596457 ITIH4Q14624 930 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 KIR2DS5Q14953 304 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 MAP9Q49MG5 647 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 DNAJC21Q5F1R6 531 aaKnown RBP10.87□□□□□ -0.67
LIG1-211ENST00000596457 AARS2Q5JTZ9 985 aaKnown RBP10.87□□□□□ -0.67
LIG1-211ENST00000596457 HIBCHQ6NVY1 386 aaPredicted RBP10.87□□□□□ -0.67
LIG1-211ENST00000596457 ZNF449Q6P9G9 518 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 CERS6Q6ZMG9 384 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 RBM44Q6ZP01 1051 aaKnown RBP10.87□□□□□ -0.67
LIG1-211ENST00000596457 SPRED1Q7Z699 444 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 SDCCAG8Q86SQ7 713 aaPredicted RBP10.87□□□□□ -0.67
LIG1-211ENST00000596457 HOOK3Q86VS8 718 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 C17orf82Q86X59 251 aaPredicted RBP10.87□□□□□ -0.67
LIG1-211ENST00000596457 AGGF1Q8N302 714 aaeCLIP10.87□□□□□ -0.67
LIG1-211ENST00000596457 JPH3Q8WXH2 748 aaPredicted RBP10.87□□□□□ -0.67
LIG1-211ENST00000596457 ELMO1Q92556 727 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 PEX13Q92968 403 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 CFAP36Q96G28 342 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 SIGLEC10Q96LC7 697 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 C12orf66Q96MD2 445 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 TBC1D10AQ9BXI6 508 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 FOXP3Q9BZS1 431 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 VPS37BQ9H9H4 285 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 RDH14Q9HBH5 336 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 IMP3Q9NV31 184 aaKnown RBP10.87□□□□□ -0.67
LIG1-211ENST00000596457 ZNF624Q9P2J8 865 aaPredicted RBP10.87□□□□□ -0.67
LIG1-211ENST00000596457 CPNE7Q9UBL6 633 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 PCDHB1Q9Y5F3 818 aa10.87□□□□□ -0.67
LIG1-211ENST00000596457 RP1P56715 2156 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 FAM237BA0A1B0GVD1 139 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 A6NCN8 305 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 SRRM3A6NNA2 597 aaPredicted RBP10.86□□□□□ -0.67
LIG1-211ENST00000596457 IQCF5A8MTL0 148 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 KIF2AO00139 706 aaPredicted RBP10.86□□□□□ -0.67
LIG1-211ENST00000596457 NTN3O00634 580 aaPredicted RBP10.86□□□□□ -0.67
LIG1-211ENST00000596457 AP2A2O94973 939 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 SEC31AO94979 1220 aaKnown RBP10.86□□□□□ -0.67
LIG1-211ENST00000596457 FTH1P02794 183 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 TUBB4AP04350 444 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 SLC35G4P0C7Q5 338 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 BRAFP15056 766 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 XRCC1P18887 633 aaPredicted RBP10.86□□□□□ -0.67
LIG1-211ENST00000596457 MPSTP25325 297 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 FMO4P31512 558 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 PREPP48147 710 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 TTPAP49638 278 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 EIF3BP55884 814 aaKnown RBP10.86□□□□□ -0.67
LIG1-211ENST00000596457 ARL4CP56559 192 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 DMPKQ09013 629 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 CALCOCO2Q13137 446 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 BOP1Q14137 746 aaKnown RBP10.86□□□□□ -0.67
LIG1-211ENST00000596457 KRT33BQ14525 404 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 MORF4L2Q15014 288 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 RPE65Q16518 533 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 WHAMMP3Q1A5X7 153 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 MSS51Q4VC12 460 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 SYTL3Q4VX76 610 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 SNAP47Q5SQN1 464 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.86□□□□□ -0.67
LIG1-211ENST00000596457 CDCP2Q5VXM1 449 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 METRNLQ641Q3 311 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 PTRHD1Q6GMV3 140 aaKnown RBP10.86□□□□□ -0.67
LIG1-211ENST00000596457 KIAA0930Q6ICG6 404 aaPredicted RBP10.86□□□□□ -0.67
LIG1-211ENST00000596457 MRNIPQ6NTE8 343 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 DUS1LQ6P1R4 473 aaKnown RBP10.86□□□□□ -0.67
LIG1-211ENST00000596457 ABRAXAS1Q6UWZ7 409 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 PIM3Q86V86 326 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 ANKMY2Q8IV38 441 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 PDIK1LQ8N165 341 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 KRT222Q8N1A0 295 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 KIF18AQ8NI77 898 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 WDR48Q8TAF3 677 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 HM13Q8TCT9 377 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 NCSTNQ92542 709 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 SH3KBP1Q96B97 665 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 ATXN7L3BQ96GX2 97 aa10.86□□□□□ -0.67
LIG1-211ENST00000596457 LINC00615Q96LM1 132 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms