RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 ZNF449Q6P9G9 518 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 DET1Q7L5Y6 550 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 ARHGAP22Q7Z5H3 698 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 SNRNP27Q8WVK2 155 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 ZFPM2Q8WW38 1151 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 ANP32BQ92688 251 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 SGF29Q96ES7 293 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 TTC1Q99614 292 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 ZPBPQ9BS86 351 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 TBC1D10AQ9BXI6 508 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 JRKLQ9Y4A0 524 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 OR52A4PA6NMU1 304 aa17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 STMND1H3BQB6 276 aa17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 ZSCAN12O43309 604 aa17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 CEP104O60308 925 aa17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 AP2A2O94973 939 aa17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 C9P02748 559 aa17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 APRTP07741 180 aa17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 FGF3P11487 239 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 MTHFD1P11586 935 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 TPH1P17752 444 aa17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 PBLDP30039 288 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 ETV5P41161 510 aa17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 VAC14Q08AM6 782 aa17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 GPR18Q14330 331 aa17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 NFE2L1Q14494 772 aa17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 ITIH4Q14624 930 aa17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 SIX1Q15475 284 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 DCAF12Q5T6F0 453 aa17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 GSTA5Q7RTV2 222 aa17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 FAM129CQ86XR2 697 aa17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 TAB3Q8N5C8 712 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 LSM14AQ8ND56 463 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 OR52K1Q8NGK4 314 aa17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 ZDHHC12Q96GR4 267 aa17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 CDKN2AIPNLQ96HQ2 116 aa17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 CCNL2Q96S94 520 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 NAP1L3Q99457 506 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 RAB33BQ9H082 229 aa17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 SLC39A1Q9NY26 324 aa17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 TMEM9Q9P0T7 183 aa17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 HEBP2Q9Y5Z4 205 aa17.38■□□□□ 0.37
SHKBP1-204ENST00000594862 C9orf172C9J069 976 aa17.37■□□□□ 0.37
SHKBP1-204ENST00000594862 CCL4P13236 92 aa17.37■□□□□ 0.37
SHKBP1-204ENST00000594862 ADRA1DP25100 572 aa17.37■□□□□ 0.37
SHKBP1-204ENST00000594862 MPSTP25325 297 aa17.37■□□□□ 0.37
SHKBP1-204ENST00000594862 NDUFS1P28331 727 aa17.37■□□□□ 0.37
SHKBP1-204ENST00000594862 NSG1P42857 185 aa17.37■□□□□ 0.37
SHKBP1-204ENST00000594862 ATP1A2P50993 1020 aa17.37■□□□□ 0.37
SHKBP1-204ENST00000594862 RHDQ02161 417 aa17.37■□□□□ 0.37
SHKBP1-204ENST00000594862 CLCA4Q14CN2 919 aa17.37■□□□□ 0.37
SHKBP1-204ENST00000594862 RPE65Q16518 533 aa17.37■□□□□ 0.37
SHKBP1-204ENST00000594862 SNAP47Q5SQN1 464 aa17.37■□□□□ 0.37
SHKBP1-204ENST00000594862 LYPLAL1Q5VWZ2 237 aa17.37■□□□□ 0.37
SHKBP1-204ENST00000594862 CEACAM20Q6UY09 585 aa17.37■□□□□ 0.37
SHKBP1-204ENST00000594862 CCDC81Q6ZN84 652 aa17.37■□□□□ 0.37
SHKBP1-204ENST00000594862 TAS2R42Q7RTR8 314 aa17.37■□□□□ 0.37
SHKBP1-204ENST00000594862 SERPINA9Q86WD7 417 aa17.37■□□□□ 0.37
SHKBP1-204ENST00000594862 C9orf72Q96LT7 481 aa17.37■□□□□ 0.37
SHKBP1-204ENST00000594862 CASS4Q9NQ75 786 aa17.37■□□□□ 0.37
SHKBP1-204ENST00000594862 EPHA6Q9UF33 1036 aa17.37■□□□□ 0.37
SHKBP1-204ENST00000594862 WDR37Q9Y2I8 494 aa17.37■□□□□ 0.37
SHKBP1-204ENST00000594862 COLEC10Q9Y6Z7 277 aa17.37■□□□□ 0.37
SHKBP1-204ENST00000594862 HELZ2Q9BYK8 2649 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-204ENST00000594862 EFCAB7A8K855 629 aa17.36■□□□□ 0.37
SHKBP1-204ENST00000594862 CA5AP35218 305 aa17.36■□□□□ 0.37
SHKBP1-204ENST00000594862 PPARGP37231 505 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-204ENST00000594862 CDK16Q00536 496 aa17.36■□□□□ 0.37
SHKBP1-204ENST00000594862 MC2RQ01718 297 aa17.36■□□□□ 0.37
SHKBP1-204ENST00000594862 RPA4Q13156 261 aa17.36■□□□□ 0.37
SHKBP1-204ENST00000594862 PLCL1Q15111 1095 aa17.36■□□□□ 0.37
SHKBP1-204ENST00000594862 AFTPHQ6ULP2 937 aa17.36■□□□□ 0.37
SHKBP1-204ENST00000594862 PACS1Q6VY07 963 aa17.36■□□□□ 0.37
SHKBP1-204ENST00000594862 CERS6Q6ZMG9 384 aa17.36■□□□□ 0.37
SHKBP1-204ENST00000594862 FAM83HQ6ZRV2 1179 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-204ENST00000594862 PRSS42Q7Z5A4 293 aa17.36■□□□□ 0.37
SHKBP1-204ENST00000594862 PPHLN1Q8NEY8 458 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-204ENST00000594862 ART4Q93070 314 aa17.36■□□□□ 0.37
SHKBP1-204ENST00000594862 CRELD1Q96HD1 420 aa17.36■□□□□ 0.37
SHKBP1-204ENST00000594862 PBKQ96KB5 322 aa17.36■□□□□ 0.37
SHKBP1-204ENST00000594862 FBXO8Q9NRD0 319 aa17.36■□□□□ 0.37
SHKBP1-204ENST00000594862 IMP3Q9NV31 184 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-204ENST00000594862 FOXJ2Q9P0K8 574 aa17.36■□□□□ 0.37
SHKBP1-204ENST00000594862 PSMD13Q9UNM6 376 aa17.36■□□□□ 0.37
SHKBP1-204ENST00000594862 PTPRQQ9UMZ3 2332 aa17.36■□□□□ 0.37
SHKBP1-204ENST00000594862 A8MU76 341 aa17.35■□□□□ 0.37
SHKBP1-204ENST00000594862 CCL22O00626 93 aa17.35■□□□□ 0.37
SHKBP1-204ENST00000594862 SGTAO43765 313 aa17.35■□□□□ 0.37
SHKBP1-204ENST00000594862 RPL22P35268 128 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-204ENST00000594862 AARS2Q5JTZ9 985 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-204ENST00000594862 ARMC3Q5W041 872 aa17.35■□□□□ 0.37
SHKBP1-204ENST00000594862 DTX1Q86Y01 620 aa17.35■□□□□ 0.37
SHKBP1-204ENST00000594862 CFAP206Q8IYR0 622 aa17.35■□□□□ 0.37
SHKBP1-204ENST00000594862 BMPERQ8N8U9 685 aa17.35■□□□□ 0.37
SHKBP1-204ENST00000594862 C12orf66Q96MD2 445 aa17.35■□□□□ 0.37
SHKBP1-204ENST00000594862 BBC3Q96PG8 261 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-204ENST00000594862 CD180Q99467 661 aa17.35■□□□□ 0.37
SHKBP1-204ENST00000594862 WWP1Q9H0M0 922 aa17.35■□□□□ 0.37
SHKBP1-204ENST00000594862 ZNF768Q9H5H4 540 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-204ENST00000594862 FAM96AQ9H5X1 160 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms