RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 ARL5AQ9Y689 179 aa12.96□□□□□ -0.33
H3F3B-213ENST00000593254 A0A0U1RQJ8 604 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 C5orf60A6NFR6 353 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 OR52A4PA6NMU1 304 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 C2orf81A6NN90 581 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 EFCAB7A8K855 629 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 A8MU76 341 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 MIF4GDA9UHW6 222 aaKnown RBP12.95□□□□□ -0.34
H3F3B-213ENST00000593254 KCNJ13O60928 360 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 PRAMEF1O95521 474 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 LIFP15018 202 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 LPOP22079 712 aaPredicted RBP12.95□□□□□ -0.34
H3F3B-213ENST00000593254 MAPK9P45984 424 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 CTSCP53634 463 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 DRG2P55039 364 aaKnown RBP12.95□□□□□ -0.34
H3F3B-213ENST00000593254 KIF5AQ12840 1032 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 KLF1Q13351 362 aaPredicted RBP12.95□□□□□ -0.34
H3F3B-213ENST00000593254 MSLNQ13421 630 aaPredicted RBP12.95□□□□□ -0.34
H3F3B-213ENST00000593254 PRPSAP1Q14558 356 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 PTPRCAPQ14761 206 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 GPRC6AQ5T6X5 926 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 HIST2H2BCQ6DN03 193 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 PLXDC1Q8IUK5 500 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 TRIM48Q8IWZ4 208 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 SYCE1Q8N0S2 351 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 TXLNBQ8N3L3 684 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 UBL4BQ8N7F7 174 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 RASGEF1AQ8N9B8 481 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 CCDC110Q8TBZ0 833 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 PPP1R2P1Q96PQ5 205 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 APOL2Q9BQE5 337 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 DESI2Q9BSY9 194 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 LRRC4CQ9HCJ2 640 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 SLC40A1Q9NP59 571 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 SLC39A1Q9NY26 324 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 OGFRQ9NZT2 677 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 PACSIN2Q9UNF0 486 aaPredicted RBP12.95□□□□□ -0.34
H3F3B-213ENST00000593254 WDR37Q9Y2I8 494 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 DNMT3AQ9Y6K1 912 aaPredicted RBP12.95□□□□□ -0.34
H3F3B-213ENST00000593254 SLC30A1Q9Y6M5 507 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 DOPEY1Q5JWR5 2465 aa12.95□□□□□ -0.34
H3F3B-213ENST00000593254 GOLGA6L9A6NEM1 432 aa12.94□□□□□ -0.34
H3F3B-213ENST00000593254 DDX3YO15523 660 aaKnown RBP12.94□□□□□ -0.34
H3F3B-213ENST00000593254 UBXN7O94888 489 aa12.94□□□□□ -0.34
H3F3B-213ENST00000593254 FTCDO95954 541 aa12.94□□□□□ -0.34
H3F3B-213ENST00000593254 C9P02748 559 aa12.94□□□□□ -0.34
H3F3B-213ENST00000593254 ANKRD34CP0C6C1 535 aa12.94□□□□□ -0.34
H3F3B-213ENST00000593254 GFERP55789 205 aa12.94□□□□□ -0.34
H3F3B-213ENST00000593254 MC2RQ01718 297 aa12.94□□□□□ -0.34
H3F3B-213ENST00000593254 DCAF12Q5T6F0 453 aa12.94□□□□□ -0.34
H3F3B-213ENST00000593254 ANKS6Q68DC2 871 aa12.94□□□□□ -0.34
H3F3B-213ENST00000593254 DENND5AQ6IQ26 1287 aa12.94□□□□□ -0.34
H3F3B-213ENST00000593254 TMEM220Q6QAJ8 160 aa12.94□□□□□ -0.34
H3F3B-213ENST00000593254 AMZ2Q86W34 360 aa12.94□□□□□ -0.34
H3F3B-213ENST00000593254 RBM12BQ8IXT5 1001 aaKnown RBP12.94□□□□□ -0.34
H3F3B-213ENST00000593254 TTC13Q8NBP0 860 aa12.94□□□□□ -0.34
H3F3B-213ENST00000593254 OR4K2Q8NGD2 314 aa12.94□□□□□ -0.34
H3F3B-213ENST00000593254 C9orf43Q8TAL5 461 aaPredicted RBP12.94□□□□□ -0.34
H3F3B-213ENST00000593254 ZNF398Q8TD17 642 aa12.94□□□□□ -0.34
H3F3B-213ENST00000593254 TEFMQ96QE5 360 aaKnown RBP12.94□□□□□ -0.34
H3F3B-213ENST00000593254 C19orf43Q9BQ61 176 aa12.94□□□□□ -0.34
H3F3B-213ENST00000593254 ARNT2Q9HBZ2 717 aa12.94□□□□□ -0.34
H3F3B-213ENST00000593254 ZNF71Q9NQZ8 489 aaPredicted RBP12.94□□□□□ -0.34
H3F3B-213ENST00000593254 FKBPLQ9UIM3 349 aa12.94□□□□□ -0.34
H3F3B-213ENST00000593254 KCTD3Q9Y597 815 aa12.94□□□□□ -0.34
H3F3B-213ENST00000593254 HIVEP3Q5T1R4 2406 aa12.94□□□□□ -0.34
H3F3B-213ENST00000593254 OR2AG2A6NM03 316 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 ZNF891A8MT65 544 aaPredicted RBP12.93□□□□□ -0.34
H3F3B-213ENST00000593254 AGAP14A8MT82 685 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 POP7O75817 140 aaKnown RBP12.93□□□□□ -0.34
H3F3B-213ENST00000593254 SRP72O76094 671 aaKnown RBP12.93□□□□□ -0.34
H3F3B-213ENST00000593254 CRTAMO95727 393 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 HALP42357 657 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 CAPZBP47756 277 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 ZNF140P52738 457 aaPredicted RBP12.93□□□□□ -0.34
H3F3B-213ENST00000593254 XIAPP98170 497 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 PDE1BQ01064 536 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 GPR18Q14330 331 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 LONRF2Q1L5Z9 754 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 KCTD11Q693B1 232 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 IL22RA1Q8N6P7 574 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 SPC24Q8NBT2 197 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 RSC1A1Q92681 617 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 CXorf40BQ96DE9 158 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 RTP4Q96DX8 246 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 HES6Q96HZ4 224 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 SLC45A3Q96JT2 553 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 ZNF514Q96K75 400 aaPredicted RBP12.93□□□□□ -0.34
H3F3B-213ENST00000593254 C9orf72Q96LT7 481 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 TBL1YQ9BQ87 522 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 ZPBPQ9BS86 351 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 SPRY4Q9C004 299 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 FBXO8Q9NRD0 319 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 SIDT1Q9NXL6 827 aaKnown RBP12.93□□□□□ -0.34
H3F3B-213ENST00000593254 PLEKHB1Q9UF11 243 aaPredicted RBP12.93□□□□□ -0.34
H3F3B-213ENST00000593254 KLHL3Q9UH77 587 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 FEZ2Q9UHY8 353 aaPredicted RBP12.93□□□□□ -0.34
H3F3B-213ENST00000593254 PILRAQ9UKJ1 303 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 CAPN6Q9Y6Q1 641 aa12.93□□□□□ -0.34
H3F3B-213ENST00000593254 ENO4A6NNW6 628 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms