RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 ING5Q8WYH8 240 aa23.29■■□□□ 1.32
NPLOC4-217ENST00000574897 EGFL8Q99944 293 aa23.29■■□□□ 1.32
NPLOC4-217ENST00000574897 GPATCH1Q9BRR8 931 aaKnown RBP23.29■■□□□ 1.32
NPLOC4-217ENST00000574897 TMEM79Q9BSE2 394 aa23.29■■□□□ 1.32
NPLOC4-217ENST00000574897 FAM126AQ9BYI3 521 aaPredicted RBP23.29■■□□□ 1.32
NPLOC4-217ENST00000574897 WBP1LQ9NX94 342 aa23.29■■□□□ 1.32
NPLOC4-217ENST00000574897 B4GALT6Q9UBX8 382 aa23.29■■□□□ 1.32
NPLOC4-217ENST00000574897 ZMYM5Q9UJ78 669 aa23.29■■□□□ 1.32
NPLOC4-217ENST00000574897 TMCO1Q9UM00 188 aa23.29■■□□□ 1.32
NPLOC4-217ENST00000574897 NDUFAF1Q9Y375 327 aa23.29■■□□□ 1.32
NPLOC4-217ENST00000574897 DTNAQ9Y4J8 743 aa23.29■■□□□ 1.32
NPLOC4-217ENST00000574897 IRAK3Q9Y616 596 aa23.29■■□□□ 1.32
NPLOC4-217ENST00000574897 AK5Q9Y6K8 562 aa23.29■■□□□ 1.32
NPLOC4-217ENST00000574897 AGAP14A8MT82 685 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 VPS4BO75351 444 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 S100BP04271 92 aaPredicted RBP23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 DGKAP23743 735 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 GSTA3Q16772 222 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 GPR33Q49SQ1 333 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 ZFP1Q6P2D0 407 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 IL27RAQ6UWB1 636 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 SFRP1Q8N474 314 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 PCYOX1LQ8NBM8 494 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 FAM110BQ8TC76 370 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 PPP2R3CQ969Q6 453 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 ISG20Q96AZ6 181 aaKnown RBP23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 MIEF2Q96C03 454 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 LRGUKQ96M69 825 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 IPPKQ9H8X2 491 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 BCAP29Q9UHQ4 241 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 PTBP2Q9UKA9 531 aaKnown RBP23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 TMPRSS11EQ9UL52 423 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 OARD1Q9Y530 152 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 ZFC3H1O60293 1989 aaKnown RBP23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 WEE1P30291 646 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 TRAF3Q13114 568 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 HABP4Q5JVS0 413 aaKnown RBP23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 DET1Q7L5Y6 550 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 PBXIP1Q96AQ6 731 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 ROPN1LQ96C74 230 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 SPDL1Q96EA4 605 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 DCUN1D1Q96GG9 259 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 MCCC1Q96RQ3 725 aaPredicted RBP23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 VCX3BQ9H321 246 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 YY1AP1Q9H869 796 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 SPHK2Q9NRA0 654 aa23.28■■□□□ 1.32
NPLOC4-217ENST00000574897 BBIP1A8MTZ0 92 aa23.27■■□□□ 1.32
NPLOC4-217ENST00000574897 ZCCHC18P0CG32 403 aa23.27■■□□□ 1.32
NPLOC4-217ENST00000574897 PTPN2P17706 415 aa23.27■■□□□ 1.32
NPLOC4-217ENST00000574897 IL12AP29459 219 aa23.27■■□□□ 1.32
NPLOC4-217ENST00000574897 EPHA5P54756 1037 aa23.27■■□□□ 1.32
NPLOC4-217ENST00000574897 AAK1Q2M2I8 961 aa23.27■■□□□ 1.32
NPLOC4-217ENST00000574897 PLA2G4EQ3MJ16 856 aa23.27■■□□□ 1.32
NPLOC4-217ENST00000574897 SAMD4BQ5PRF9 694 aaKnown RBP23.27■■□□□ 1.32
NPLOC4-217ENST00000574897 SPATA19Q7Z5L4 167 aa23.27■■□□□ 1.32
NPLOC4-217ENST00000574897 FNDC5Q8NAU1 212 aa23.27■■□□□ 1.32
NPLOC4-217ENST00000574897 OR2A12Q8NGT7 310 aa23.27■■□□□ 1.32
NPLOC4-217ENST00000574897 TUBGCP5Q96RT8 1024 aa23.27■■□□□ 1.32
NPLOC4-217ENST00000574897 LATS2Q9NRM7 1088 aa23.27■■□□□ 1.32
NPLOC4-217ENST00000574897 ALPK3Q96L96 1907 aa23.27■■□□□ 1.32
NPLOC4-217ENST00000574897 POP4O95707 220 aaKnown RBP23.27■■□□□ 1.32
NPLOC4-217ENST00000574897 PAGE3Q5JUK9 113 aa23.27■■□□□ 1.32
NPLOC4-217ENST00000574897 FBXL19Q6PCT2 694 aa23.27■■□□□ 1.32
NPLOC4-217ENST00000574897 FBXO46Q6PJ61 603 aaPredicted RBP23.27■■□□□ 1.32
NPLOC4-217ENST00000574897 SPPL3Q8TCT6 385 aa23.27■■□□□ 1.32
NPLOC4-217ENST00000574897 SLCO4A1Q96BD0 722 aa23.27■■□□□ 1.32
NPLOC4-217ENST00000574897 ARMC5Q96C12 935 aa23.27■■□□□ 1.32
NPLOC4-217ENST00000574897 SPATS2LQ9NUQ6 558 aaKnown RBP23.27■■□□□ 1.32
NPLOC4-217ENST00000574897 PPIL1Q9Y3C6 166 aa23.27■■□□□ 1.32
NPLOC4-217ENST00000574897 CROCCQ5TZA2 2017 aa23.26■■□□□ 1.31
NPLOC4-217ENST00000574897 SYNCRIPO60506 623 aaKnown RBP23.26■■□□□ 1.31
NPLOC4-217ENST00000574897 MTX2O75431 263 aa23.26■■□□□ 1.31
NPLOC4-217ENST00000574897 BMPR1AP36894 532 aa23.26■■□□□ 1.31
NPLOC4-217ENST00000574897 NAA20P61599 178 aa23.26■■□□□ 1.31
NPLOC4-217ENST00000574897 ERVK-8P63133 956 aa23.26■■□□□ 1.31
NPLOC4-217ENST00000574897 ABRAXAS2Q15018 415 aa23.26■■□□□ 1.31
NPLOC4-217ENST00000574897 LYPLAL1Q5VWZ2 237 aa23.26■■□□□ 1.31
NPLOC4-217ENST00000574897 SLC15A3Q8IY34 581 aa23.26■■□□□ 1.31
NPLOC4-217ENST00000574897 CPEB1Q9BZB8 566 aaKnown RBP23.26■■□□□ 1.31
NPLOC4-217ENST00000574897 CMTM6Q9NX76 183 aa23.26■■□□□ 1.31
NPLOC4-217ENST00000574897 ZDHHC3Q9NYG2 299 aa23.26■■□□□ 1.31
NPLOC4-217ENST00000574897 SLAMF8Q9P0V8 285 aa23.26■■□□□ 1.31
NPLOC4-217ENST00000574897 EPS15L1Q9UBC2 864 aa23.26■■□□□ 1.31
NPLOC4-217ENST00000574897 UQCRBP14927 111 aa23.26■■□□□ 1.31
NPLOC4-217ENST00000574897 CCR7P32248 378 aa23.26■■□□□ 1.31
NPLOC4-217ENST00000574897 ZNF77Q15935 545 aa23.26■■□□□ 1.31
NPLOC4-217ENST00000574897 EFL1Q7Z2Z2 1120 aaKnown RBP23.26■■□□□ 1.31
NPLOC4-217ENST00000574897 GRASPQ7Z6J2 395 aaPredicted RBP23.26■■□□□ 1.31
NPLOC4-217ENST00000574897 WWOXQ9NZC7 414 aa23.26■■□□□ 1.31
NPLOC4-217ENST00000574897 TNPO3Q9Y5L0 923 aaKnown RBP23.26■■□□□ 1.31
NPLOC4-217ENST00000574897 TXNDC9O14530 226 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 FFAR3O14843 346 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 GPR42O15529 346 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 TLL1O43897 1013 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 ARHGEF15O94989 841 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 C8BP07358 591 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 LYNP07948 512 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 LINGO3P0C6S8 592 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 PFKLP17858 780 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 ATP6V1B2P21281 511 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms