RNA–Protein interactions for RNA: ENST00000563200.5

PPP4C-205, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 5

Gene PPP4C, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-205	ENST00000563200	DNAJC1	Q96KC8	554 aa	Known RBP	21.33	■■□□□ 1.01
PPP4C-205	ENST00000563200	SIDT1	Q9NXL6	827 aa	Known RBP	21.33	■■□□□ 1.01
PPP4C-205	ENST00000563200	PSMD13	Q9UNM6	376 aa		21.33	■■□□□ 1.01
PPP4C-205	ENST00000563200	PCDHB11	Q9Y5F2	797 aa		21.33	■■□□□ 1.01
PPP4C-205	ENST00000563200	BSN	Q9UPA5	3926 aa		21.33	■■□□□ 1
PPP4C-205	ENST00000563200	TRBV5-4	A0A0C4DH59	114 aa		21.32	■■□□□ 1
PPP4C-205	ENST00000563200	KLHL33	A6NCF5	533 aa		21.32	■■□□□ 1
PPP4C-205	ENST00000563200	TOX3	O15405	576 aa	Predicted RBP	21.32	■■□□□ 1
PPP4C-205	ENST00000563200	PRB1	P04280	392 aa		21.32	■■□□□ 1
PPP4C-205	ENST00000563200	WT1	P19544	449 aa	Predicted RBP	21.32	■■□□□ 1
PPP4C-205	ENST00000563200	GPR33	Q49SQ1	333 aa		21.32	■■□□□ 1
PPP4C-205	ENST00000563200	MICALCL	Q6ZW33	695 aa		21.32	■■□□□ 1
PPP4C-205	ENST00000563200	TEFM	Q96QE5	360 aa	Known RBP	21.32	■■□□□ 1
PPP4C-205	ENST00000563200	RAB33B	Q9H082	229 aa		21.32	■■□□□ 1
PPP4C-205	ENST00000563200	FAM96A	Q9H5X1	160 aa		21.32	■■□□□ 1
PPP4C-205	ENST00000563200	NLE1	Q9NVX2	485 aa	Predicted RBP	21.32	■■□□□ 1
PPP4C-205	ENST00000563200	EPHA6	Q9UF33	1036 aa		21.32	■■□□□ 1
PPP4C-205	ENST00000563200	CRLS1	Q9UJA2	301 aa		21.32	■■□□□ 1
PPP4C-205	ENST00000563200	IGLV3-16	A0A075B6K0	115 aa		21.31	■■□□□ 1
PPP4C-205	ENST00000563200	CAPN5	O15484	640 aa	Predicted RBP	21.31	■■□□□ 1
PPP4C-205	ENST00000563200	PSMD3	O43242	534 aa		21.31	■■□□□ 1
PPP4C-205	ENST00000563200	AMD1	P17707	334 aa		21.31	■■□□□ 1
PPP4C-205	ENST00000563200	ITGAL	P20701	1170 aa		21.31	■■□□□ 1
PPP4C-205	ENST00000563200	MC4R	P32245	332 aa		21.31	■■□□□ 1
PPP4C-205	ENST00000563200	LEPR	P48357	1165 aa	Known RBP	21.31	■■□□□ 1
PPP4C-205	ENST00000563200	PRLHR	P49683	370 aa		21.31	■■□□□ 1
PPP4C-205	ENST00000563200	CDKN1C	P49918	316 aa	Predicted RBP	21.31	■■□□□ 1
PPP4C-205	ENST00000563200	MANEA	Q5SRI9	462 aa		21.31	■■□□□ 1
PPP4C-205	ENST00000563200	LRRC8A	Q8IWT6	810 aa		21.31	■■□□□ 1
PPP4C-205	ENST00000563200	TAB3	Q8N5C8	712 aa	Predicted RBP	21.31	■■□□□ 1
PPP4C-205	ENST00000563200	INSM2	Q96T92	566 aa	Predicted RBP	21.31	■■□□□ 1
PPP4C-205	ENST00000563200	APMAP	Q9HDC9	416 aa		21.31	■■□□□ 1
PPP4C-205	ENST00000563200	WDR70	Q9NW82	654 aa		21.31	■■□□□ 1
PPP4C-205	ENST00000563200	PIH1D1	Q9NWS0	290 aa	Known RBP	21.31	■■□□□ 1
PPP4C-205	ENST00000563200	PILRA	Q9UKJ1	303 aa		21.31	■■□□□ 1
PPP4C-205	ENST00000563200	ACSL5	Q9ULC5	683 aa		21.31	■■□□□ 1
PPP4C-205	ENST00000563200	MROH6	A6NGR9	719 aa		21.3	■■□□□ 1
PPP4C-205	ENST00000563200	EIF4E1B	A6NMX2	242 aa	Known RBP	21.3	■■□□□ 1
PPP4C-205	ENST00000563200	MTHFD1	P11586	935 aa	Known RBP	21.3	■■□□□ 1
PPP4C-205	ENST00000563200	PBLD	P30039	288 aa	Predicted RBP	21.3	■■□□□ 1
PPP4C-205	ENST00000563200	POU6F1	Q14863	301 aa		21.3	■■□□□ 1
PPP4C-205	ENST00000563200	RPS6KA1	Q15418	735 aa		21.3	■■□□□ 1
PPP4C-205	ENST00000563200	SIX1	Q15475	284 aa	Predicted RBP	21.3	■■□□□ 1
PPP4C-205	ENST00000563200	HEXDC	Q8WVB3	486 aa		21.3	■■□□□ 1
PPP4C-205	ENST00000563200	C1orf54	Q8WWF1	131 aa		21.3	■■□□□ 1
PPP4C-205	ENST00000563200	JPH3	Q8WXH2	748 aa	Predicted RBP	21.3	■■□□□ 1
PPP4C-205	ENST00000563200	CDKN2AIPNL	Q96HQ2	116 aa		21.3	■■□□□ 1
PPP4C-205	ENST00000563200	TGM7	Q96PF1	710 aa		21.3	■■□□□ 1
PPP4C-205	ENST00000563200	COPS8	Q99627	209 aa		21.3	■■□□□ 1
PPP4C-205	ENST00000563200	CTRC	Q99895	268 aa		21.3	■■□□□ 1
PPP4C-205	ENST00000563200	PCDHGA4	Q9Y5G9	962 aa		21.3	■■□□□ 1
PPP4C-205	ENST00000563200	ERI2	A8K979	691 aa	Known RBP	21.29	■■□□□ 1
PPP4C-205	ENST00000563200	SUN1	O94901	812 aa		21.29	■■□□□ 1
PPP4C-205	ENST00000563200	ATP1B2	P14415	290 aa	Predicted RBP	21.29	■■□□□ 1
PPP4C-205	ENST00000563200	ZNF658B	Q4V348	819 aa	Predicted RBP	21.29	■■□□□ 1
PPP4C-205	ENST00000563200	CEACAM20	Q6UY09	585 aa		21.29	■■□□□ 1
PPP4C-205	ENST00000563200	PRSS42	Q7Z5A4	293 aa		21.29	■■□□□ 1
PPP4C-205	ENST00000563200	LINC00523	Q86TU6	105 aa		21.29	■■□□□ 1
PPP4C-205	ENST00000563200	LILRA3	Q8N6C8	439 aa	Predicted RBP	21.29	■■□□□ 1
PPP4C-205	ENST00000563200	SPDYE1	Q8NFV5	336 aa	Predicted RBP	21.29	■■□□□ 1
PPP4C-205	ENST00000563200	STYX	Q8WUJ0	223 aa		21.29	■■□□□ 1
PPP4C-205	ENST00000563200	DCUN1D1	Q96GG9	259 aa		21.29	■■□□□ 1
PPP4C-205	ENST00000563200	ZPBP	Q9BS86	351 aa		21.29	■■□□□ 1
PPP4C-205	ENST00000563200	WWP1	Q9H0M0	922 aa		21.29	■■□□□ 1
PPP4C-205	ENST00000563200	ZNF768	Q9H5H4	540 aa	Known RBP	21.29	■■□□□ 1
PPP4C-205	ENST00000563200	ETNK1	Q9HBU6	452 aa		21.29	■■□□□ 1
PPP4C-205	ENST00000563200	ZDHHC3	Q9NYG2	299 aa		21.29	■■□□□ 1
PPP4C-205	ENST00000563200	SEMA5B	Q9P283	1151 aa		21.29	■■□□□ 1
PPP4C-205	ENST00000563200	SPTA1	P02549	2419 aa		21.29	■■□□□ 1
PPP4C-205	ENST00000563200	KIF1C	O43896	1103 aa	Known RBP	21.29	■■□□□ 1
PPP4C-205	ENST00000563200	CCDC175	P0C221	793 aa		21.29	■■□□□ 1
PPP4C-205	ENST00000563200	PRSS56	P0CW18	603 aa		21.29	■■□□□ 1
PPP4C-205	ENST00000563200	RALB	P11234	206 aa		21.29	■■□□□ 1
PPP4C-205	ENST00000563200	ACRV1	P26436	265 aa		21.29	■■□□□ 1
PPP4C-205	ENST00000563200	CCZ1B	P86790	482 aa		21.29	■■□□□ 1
PPP4C-205	ENST00000563200	CCZ1	P86791	482 aa	Predicted RBP	21.29	■■□□□ 1
PPP4C-205	ENST00000563200	TAF1B	Q53T94	588 aa	Predicted RBP	21.29	■■□□□ 1
PPP4C-205	ENST00000563200	CAPRIN2	Q6IMN6	1127 aa	Known RBP	21.29	■■□□□ 1
PPP4C-205	ENST00000563200	SERPINA9	Q86WD7	417 aa		21.29	■■□□□ 1
PPP4C-205	ENST00000563200	PIANP	Q8IYJ0	282 aa		21.29	■■□□□ 1
PPP4C-205	ENST00000563200	OR52K1	Q8NGK4	314 aa		21.29	■■□□□ 1
PPP4C-205	ENST00000563200	KLHL6	Q8WZ60	621 aa		21.29	■■□□□ 1
PPP4C-205	ENST00000563200	LZTFL1	Q9NQ48	299 aa		21.29	■■□□□ 1
PPP4C-205	ENST00000563200	IMP3	Q9NV31	184 aa	Known RBP	21.29	■■□□□ 1
PPP4C-205	ENST00000563200	ZNF148	Q9UQR1	794 aa		21.29	■■□□□ 1
PPP4C-205	ENST00000563200	CFAP20	Q9Y6A4	193 aa	Known RBP	21.29	■■□□□ 1
PPP4C-205	ENST00000563200	C17orf113	A0A1B0GUU1	675 aa		21.28	■■□□□ 1
PPP4C-205	ENST00000563200	ATP1A2	P50993	1020 aa		21.28	■■□□□ 1
PPP4C-205	ENST00000563200	PPP1CA	P62136	330 aa		21.28	■■□□□ 1
PPP4C-205	ENST00000563200	PRUNE1	Q86TP1	453 aa		21.28	■■□□□ 1
PPP4C-205	ENST00000563200	GLIS1	Q8NBF1	620 aa		21.28	■■□□□ 1
PPP4C-205	ENST00000563200	ZFPM2	Q8WW38	1151 aa		21.28	■■□□□ 1
PPP4C-205	ENST00000563200	ZDHHC12	Q96GR4	267 aa		21.28	■■□□□ 1
PPP4C-205	ENST00000563200	RMDN2	Q96LZ7	410 aa		21.28	■■□□□ 1
PPP4C-205	ENST00000563200	TMEM184B	Q9Y519	407 aa	Predicted RBP	21.28	■■□□□ 1
PPP4C-205	ENST00000563200	CFAP99	D6REC4	459 aa		21.27	■■□□□ 1
PPP4C-205	ENST00000563200	POLR1C	O15160	346 aa	Predicted RBP	21.27	■■□□□ 1
PPP4C-205	ENST00000563200	RAD1	O60671	282 aa		21.27	■■□□□ 1
PPP4C-205	ENST00000563200	IFNB1	P01574	187 aa		21.27	■■□□□ 1
PPP4C-205	ENST00000563200	ETS1	P14921	441 aa		21.27	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms