RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 GALNT11Q8NCW6 608 aa13.71□□□□□ -0.22
CSPG4P12-202ENST00000559989 A0A0J9YVX5 310 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 TBL1XO60907 577 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 UGT2B4P06133 528 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 GLDCP23378 1020 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 HTR2AP28223 471 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 CRISP1P54107 249 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 TEAD4Q15561 434 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 DLG2Q15700 870 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 UBXN11Q5T124 520 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 ZNF101Q8IZC7 436 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 IGFLR1Q9H665 355 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 DENND2DQ9H6A0 471 aaPredicted RBP13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 TTC37Q6PGP7 1564 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 FAM86B1E9PN63 330 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 TBX1O43435 398 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 PLGP00747 810 aaPredicted RBP13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 AQP1P29972 269 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 MIPP30301 263 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 GNMTQ14749 295 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 BCL2A1Q16548 175 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 SLC39A12Q504Y0 691 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 RBM48Q5RL73 367 aaKnown RBP13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 LPCAT4Q643R3 524 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 FBXO33Q7Z6M2 555 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 ZNF527Q8NB42 609 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 PHC3Q8NDX5 983 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 SUN3Q8TAQ9 357 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 XAGE5Q8WWM1 108 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 RNF38Q9H0F5 515 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 GRIA1P42261 906 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 MERTKQ12866 999 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 RIOX2Q8IUF8 465 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 TRMOQ9BU70 441 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 NDUFAF4Q9P032 175 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 ZNRF3Q9ULT6 936 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 CIB4A0PJX0 185 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 KERAO60938 352 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 CXCL8P10145 99 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 GIT2Q14161 759 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 CIB1Q99828 191 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 GAL3ST1Q99999 423 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 FAM83DQ9H4H8 585 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 PTTG2Q9NZH5 202 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 ZNF510Q9Y2H8 683 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 CAPN14A8MX76 684 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 HSPA12AO43301 675 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 EPHA3P29320 983 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 DNAJA1P31689 397 aaKnown RBP13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 SLC6A9P48067 706 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 CLCN3P51790 818 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 TIGD6Q17RP2 521 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 CRYBG2Q8N1P7 616 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 AUTS2Q8WXX7 1259 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 GTPBP3Q969Y2 492 aaKnown RBP13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 GSKIPQ9P0R6 139 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 TLL2Q9Y6L7 1015 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 A0A1W2PRQ8 180 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 SLC25A14O95258 325 aaPredicted RBP13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 KHKP50053 298 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 LRRN1Q6UXK5 716 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 PHTF2Q8N3S3 785 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 ZNF606Q8WXB4 792 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 OR8D1Q8WZ84 308 aa13.7□□□□□ -0.22
CSPG4P12-202ENST00000559989 TEX13DA0A0J9YY54 714 aaPredicted RBP13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 ITGA5P08648 1049 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 CMPK1P30085 196 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 GLP1RP43220 463 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 PSEN1P49768 467 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 PIGBQ92521 554 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 NSUN4Q96CB9 384 aaKnown RBP13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 NPEPPSL1A6NEC2 478 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 ALDH3B2P48448 385 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 DEFB106AQ8N104 65 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 OR6K6Q8NGW6 343 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 KCTD15Q96SI1 283 aaPredicted RBP13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 IFT27Q9BW83 186 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 GPRC5CQ9NQ84 441 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 ELFN1P0C7U0 828 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 ALAS2P22557 587 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 GPR158Q5T848 1215 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 DUPD1Q68J44 220 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 MOXD1Q6UVY6 613 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 P4HA3Q7Z4N8 544 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 TAAR1Q96RJ0 339 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 RANBP3Q9H6Z4 567 aaPredicted RBP13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 RPL36Q9Y3U8 105 aaKnown RBP13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 TCHHQ07283 1943 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 FBP2O00757 339 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 EDNRAP25101 427 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 ZNF267Q14586 743 aaPredicted RBP13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 PPP1R26Q5T8A7 1209 aaPredicted RBP13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 VWA5B1Q5TIE3 1220 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 FAM35AQ86V20 835 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 OR5T2Q8NGG2 359 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 RETREG1Q9H6L5 497 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 TUBG2Q9NRH3 451 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 RIMKLBQ9ULI2 386 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 PCDHGA8Q9Y5G5 932 aa13.69□□□□□ -0.22
CSPG4P12-202ENST00000559989 NRKQ7Z2Y5 1582 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms