RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.83□□□□□ -0.2
SLIRP-207ENST00000556831 TTC27Q6P3X3 843 aa13.83□□□□□ -0.2
SLIRP-207ENST00000556831 ABRAXAS1Q6UWZ7 409 aa13.83□□□□□ -0.2
SLIRP-207ENST00000556831 WASH2PQ6VEQ5 465 aa13.83□□□□□ -0.2
SLIRP-207ENST00000556831 CERS6Q6ZMG9 384 aa13.83□□□□□ -0.2
SLIRP-207ENST00000556831 USP53Q70EK8 1073 aa13.83□□□□□ -0.2
SLIRP-207ENST00000556831 TMPRSS9Q7Z410 1059 aa13.83□□□□□ -0.2
SLIRP-207ENST00000556831 C11orf96Q7Z7L8 435 aa13.83□□□□□ -0.2
SLIRP-207ENST00000556831 FBXO39Q8N4B4 442 aa13.83□□□□□ -0.2
SLIRP-207ENST00000556831 OR2L2Q8NH16 312 aa13.83□□□□□ -0.2
SLIRP-207ENST00000556831 OR4L1Q8NH43 312 aa13.83□□□□□ -0.2
SLIRP-207ENST00000556831 HM13Q8TCT9 377 aa13.83□□□□□ -0.2
SLIRP-207ENST00000556831 NAT14Q8WUY8 206 aa13.83□□□□□ -0.2
SLIRP-207ENST00000556831 HDAC10Q969S8 669 aa13.83□□□□□ -0.2
SLIRP-207ENST00000556831 ZNF578Q96N58 590 aaPredicted RBP13.83□□□□□ -0.2
SLIRP-207ENST00000556831 RUNDC3BQ96NL0 473 aa13.83□□□□□ -0.2
SLIRP-207ENST00000556831 DCBLD2Q96PD2 775 aa13.83□□□□□ -0.2
SLIRP-207ENST00000556831 WASH6PQ9NQA3 447 aa13.83□□□□□ -0.2
SLIRP-207ENST00000556831 IMP3Q9NV31 184 aaKnown RBP13.83□□□□□ -0.2
SLIRP-207ENST00000556831 ASIC3Q9UHC3 531 aa13.83□□□□□ -0.2
SLIRP-207ENST00000556831 PSMD13Q9UNM6 376 aa13.83□□□□□ -0.2
SLIRP-207ENST00000556831 RAXQ9Y2V3 346 aa13.83□□□□□ -0.2
SLIRP-207ENST00000556831 PCDHGA8Q9Y5G5 932 aa13.83□□□□□ -0.2
SLIRP-207ENST00000556831 CCDC162PA2VCL2 907 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 LILRA5A6NI73 299 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 AGAP14A8MT82 685 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 IFRD1O00458 451 aaPredicted RBP13.82□□□□□ -0.2
SLIRP-207ENST00000556831 PLD2O14939 933 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 B4GAT1O43505 415 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 AP2A2O94973 939 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 NTRK1P04629 796 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 GSTM1P09488 218 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 OR56A5P0C7T3 313 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 AMD1P17707 334 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 XRCC1P18887 633 aaPredicted RBP13.82□□□□□ -0.2
SLIRP-207ENST00000556831 CD1CP29017 333 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 CSTF2P33240 577 aaKnown RBP eCLIP13.82□□□□□ -0.2
SLIRP-207ENST00000556831 MLLT3P42568 568 aaPredicted RBP13.82□□□□□ -0.2
SLIRP-207ENST00000556831 PCBP4P57723 403 aaKnown RBP13.82□□□□□ -0.2
SLIRP-207ENST00000556831 GSTM4Q03013 218 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 TRA2AQ13595 282 aaKnown RBP eCLIP13.82□□□□□ -0.2
SLIRP-207ENST00000556831 ITIH4Q14624 930 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 DBN1Q16643 649 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 TBC1D25Q3MII6 688 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 SYTL3Q4VX76 610 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 NKAIN2Q5VXU1 208 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 LRRC8BQ6P9F7 803 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 KLHL35Q6PF15 583 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 B3GNT8Q7Z7M8 397 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 JAMLQ86YT9 394 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 OR4D9Q8NGE8 314 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 NCSTNQ92542 709 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 FGF11Q92914 225 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 CCDC97Q96F63 343 aaPredicted RBP13.82□□□□□ -0.2
SLIRP-207ENST00000556831 LINC00615Q96LM1 132 aaPredicted RBP13.82□□□□□ -0.2
SLIRP-207ENST00000556831 NUDT22Q9BRQ3 303 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 UCK1Q9HA47 277 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 XAB2Q9HCS7 855 aaKnown RBP13.82□□□□□ -0.2
SLIRP-207ENST00000556831 CATSPERZQ9NTU4 200 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 LOXL2Q9Y4K0 774 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.82□□□□□ -0.2
SLIRP-207ENST00000556831 PTPN13Q12923 2485 aa13.82□□□□□ -0.2
SLIRP-207ENST00000556831 ACACAQ13085 2346 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 ANKRD17O75179 2603 aaKnown RBP13.81□□□□□ -0.2
SLIRP-207ENST00000556831 TRBV5-4A0A0C4DH59 114 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 OR52A4PA6NMU1 304 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 TLX3O43711 291 aaPredicted RBP13.81□□□□□ -0.2
SLIRP-207ENST00000556831 TNFSF15O95150 251 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 GOT2P00505 430 aaKnown RBP13.81□□□□□ -0.2
SLIRP-207ENST00000556831 MGAT1P26572 445 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 CDKN1CP49918 316 aaPredicted RBP13.81□□□□□ -0.2
SLIRP-207ENST00000556831 ARSDP51689 593 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 ERVPABLB-1P60509 514 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 UBE2IP63279 158 aaKnown RBP13.81□□□□□ -0.2
SLIRP-207ENST00000556831 SNAP47Q5SQN1 464 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 TMEM164Q5U3C3 297 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 ARMC3Q5W041 872 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 TMEM26Q6ZUK4 368 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 PLXDC1Q8IUK5 500 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 CFAP206Q8IYR0 622 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 OR13J1Q8NGT2 312 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 CRELD1Q96HD1 420 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 CCDC74BQ96LY2 380 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 C12orf66Q96MD2 445 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 BBC3Q96PG8 261 aaPredicted RBP13.81□□□□□ -0.2
SLIRP-207ENST00000556831 CCM2Q9BSQ5 444 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 WWP1Q9H0M0 922 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 SEMA6CQ9H3T2 930 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 CHRAC1Q9NRG0 131 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 WDR70Q9NW82 654 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 SCHIP1Q9P0W5 487 aaPredicted RBP13.81□□□□□ -0.2
SLIRP-207ENST00000556831 PISDQ9UG56 409 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 SLC2A6Q9UGQ3 507 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 HEBP2Q9Y5Z4 205 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 COLEC10Q9Y6Z7 277 aa13.81□□□□□ -0.2
SLIRP-207ENST00000556831 IGLV3-16A0A075B6K0 115 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 C17orf113A0A1B0GUU1 675 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 OR51F1A6NGY5 319 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 HGSO14964 777 aaPredicted RBP13.8□□□□□ -0.2
SLIRP-207ENST00000556831 RRP9O43818 475 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms