RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 CCT5P48643 541 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 LIG3P49916 1009 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 COPAP53621 1224 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 PCBP4P57723 403 aaKnown RBP14.29□□□□□ -0.12
SHMT2-208ENST00000553868 SLC18A2Q05940 514 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 ACOX1Q15067 660 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 CHRNA6Q15825 494 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 SEPT7Q16181 437 aaKnown RBP14.29□□□□□ -0.12
SHMT2-208ENST00000553868 C4orf17Q53FE4 359 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 PIP5KL1Q5T9C9 394 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 FAM45BPQ6NSW5 357 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 ZNF765Q7L2R6 523 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 HSD11B1LQ7Z5J1 315 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 LCA5Q86VQ0 697 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 TMPRSS6Q8IU80 811 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 C4orf33Q8N1A6 199 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 GPATCH11Q8N954 259 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 EXD3Q8N9H8 876 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 GPR26Q8NDV2 337 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 FAM45AQ8TCE6 357 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 SIPA1Q96FS4 1042 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 APOPT1Q96IL0 206 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 HIC2Q96JB3 615 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 SERAC1Q96JX3 654 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 TSNARE1Q96NA8 513 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 ZSCAN5AQ9BUG6 496 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 C6orf106Q9H6K1 298 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-208ENST00000553868 TM9SF3Q9HD45 589 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 SNX15Q9NRS6 342 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 MKS1Q9NXB0 559 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 TLK1Q9UKI8 766 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 SLC39A10Q9ULF5 831 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 MTO1Q9Y2Z2 717 aaKnown RBP14.29□□□□□ -0.12
SHMT2-208ENST00000553868 PCDHB1Q9Y5F3 818 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 FADS3Q9Y5Q0 445 aa14.29□□□□□ -0.12
SHMT2-208ENST00000553868 TRBV5-4A0A0C4DH59 114 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 UBA6A0AVT1 1052 aaPredicted RBP14.28□□□□□ -0.12
SHMT2-208ENST00000553868 TMEM120BA0PK00 339 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 HMX2A2RU54 273 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 F8W8V4 182 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 H3BMM5 538 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 USP9YO00507 2555 aaPredicted RBP14.28□□□□□ -0.12
SHMT2-208ENST00000553868 TPP1O14773 563 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 LZTS3O60299 673 aaPredicted RBP14.28□□□□□ -0.12
SHMT2-208ENST00000553868 RFPL1O75677 317 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 RNASEH2AO75792 299 aaKnown RBP14.28□□□□□ -0.12
SHMT2-208ENST00000553868 ZWINTO95229 277 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 C7P10643 843 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 PYGBP11216 843 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 ACADMP11310 421 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 STMN1P16949 149 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 ZNF7P17097 686 aaPredicted RBP14.28□□□□□ -0.12
SHMT2-208ENST00000553868 GABRB3P28472 473 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 DRD3P35462 400 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 METAP1P53582 386 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 UCNP55089 124 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 ADARP55265 1226 aaKnown RBP14.28□□□□□ -0.12
SHMT2-208ENST00000553868 ITIH4Q14624 930 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 HIST2H2BCQ6DN03 193 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 CNSTQ6PJW8 725 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.28□□□□□ -0.12
SHMT2-208ENST00000553868 USP30Q70CQ3 517 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 RAPH1Q70E73 1250 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 TECPR1Q7Z6L1 1165 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 RBFAQ8N0V3 343 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 AADATQ8N5Z0 425 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 TRAM1L1Q8N609 369 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 BANPQ8N9N5 519 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 HEXDCQ8WVB3 486 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 COQ10AQ96MF6 247 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 WRAP53Q9BUR4 548 aaKnown RBP14.28□□□□□ -0.12
SHMT2-208ENST00000553868 SPATA16Q9BXB7 569 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 FBXL12Q9NXK8 326 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 DCDC2Q9UHG0 476 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 FZD4Q9ULV1 537 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 ITM2BQ9Y287 266 aa14.28□□□□□ -0.12
SHMT2-208ENST00000553868 A0A087X1B8 175 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 A0A1W2PP55 124 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 GOLGA8RI6L899 631 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 GAPDHSO14556 408 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-208ENST00000553868 PRMT5O14744 637 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-208ENST00000553868 TM9SF1O15321 606 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 GLRA3O75311 464 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 ESR1P03372 595 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 ALDOAP04075 364 aaKnown RBP14.27□□□□□ -0.13
SHMT2-208ENST00000553868 PYGLP06737 847 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 GSTA1P08263 222 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 COL6A2P12110 1019 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 CTSKP43235 329 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 MAGEA12P43365 314 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 RAB10P61026 200 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 UBAP2LQ14157 1087 aaKnown RBP14.27□□□□□ -0.13
SHMT2-208ENST00000553868 SEMA3AQ14563 771 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 TEAD4Q15561 434 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 INAVAQ3KP66 663 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 AGBL4Q5VU57 503 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 Q6ZVL8 140 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 LDB1Q86U70 411 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-208ENST00000553868 NLRP8Q86W28 1048 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 SERPINA9Q86WD7 417 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms