RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 FAM8A1Q9UBU6 413 aa9.33□□□□□ -0.92
USP15-208ENST00000548524 KLHL3Q9UH77 587 aa9.33□□□□□ -0.92
USP15-208ENST00000548524 ZKSCAN5Q9Y2L8 839 aa9.33□□□□□ -0.92
USP15-208ENST00000548524 WDFY3Q8IZQ1 3526 aa9.33□□□□□ -0.92
USP15-208ENST00000548524 LRP4O75096 1905 aa9.33□□□□□ -0.92
USP15-208ENST00000548524 EPG5Q9HCE0 2579 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 CCDC78A2IDD5 438 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 KLHL33A6NCF5 533 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 MGAT4DA6NG13 374 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 PRR19A6NJB7 356 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 EFCAB7A8K855 629 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 NVLO15381 856 aaKnown RBP9.32□□□□□ -0.92
USP15-208ENST00000548524 UBXN7O94888 489 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 APRTP07741 180 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 ZSCAN5DPP0CG00 497 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 CCL4P13236 92 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 ATP1B2P14415 290 aaPredicted RBP9.32□□□□□ -0.92
USP15-208ENST00000548524 BRAFP15056 766 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 TYRP1P17643 537 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 VARSP26640 1264 aaKnown RBP9.32□□□□□ -0.92
USP15-208ENST00000548524 CXCR5P32302 372 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 TMPRSS3P57727 454 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 DMPKQ09013 629 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 CLCA4Q14CN2 919 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 SIX1Q15475 284 aaPredicted RBP9.32□□□□□ -0.92
USP15-208ENST00000548524 SKIDA1Q1XH10 827 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 BCL7AQ4VC05 210 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 CCDC38Q502W7 563 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 DRICH1Q6PGQ1 229 aaPredicted RBP9.32□□□□□ -0.92
USP15-208ENST00000548524 FAM83HQ6ZRV2 1179 aaPredicted RBP9.32□□□□□ -0.92
USP15-208ENST00000548524 SERPINA9Q86WD7 417 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 PLXDC1Q8IUK5 500 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 BEND7Q8N7W2 519 aaPredicted RBP9.32□□□□□ -0.92
USP15-208ENST00000548524 OR2L2Q8NH16 312 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 NAT14Q8WUY8 206 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.32□□□□□ -0.922e-6■■■■■ 54.9
USP15-208ENST00000548524 CDKN2AIPNLQ96HQ2 116 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 FCRL3Q96P31 734 aaPredicted RBP9.32□□□□□ -0.92
USP15-208ENST00000548524 TAAR9Q96RI9 348 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 HOMER3Q9NSC5 361 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 SLC39A1Q9NY26 324 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 ZDHHC3Q9NYG2 299 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 PSMD13Q9UNM6 376 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 DRG1Q9Y295 367 aaKnown RBP9.32□□□□□ -0.92
USP15-208ENST00000548524 WDR37Q9Y2I8 494 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 PCDHB11Q9Y5F2 797 aa9.32□□□□□ -0.92
USP15-208ENST00000548524 GOLGA4Q13439 2230 aaKnown RBP9.32□□□□□ -0.92
USP15-208ENST00000548524 DMXL2Q8TDJ6 3036 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 IGF2RP11717 2491 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 ZFHX4Q86UP3 3567 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 PRAMEF33A0A0G2JMD5 474 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 HEATR9A2RTY3 570 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 C9orf172C9J069 976 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 H7C0S8 307 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 ZSCAN12O43309 604 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 PRAMEF10O60809 474 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 SUN1O94901 812 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 POLBP06746 335 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 SLC35G4P0C7Q5 338 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 LIPCP11150 499 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 FGF3P11487 239 aaPredicted RBP9.31□□□□□ -0.92
USP15-208ENST00000548524 MSNP26038 577 aaKnown RBP9.31□□□□□ -0.92
USP15-208ENST00000548524 ACRV1P26436 265 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 CD82P27701 267 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 RPL22P35268 128 aaKnown RBP9.31□□□□□ -0.92
USP15-208ENST00000548524 KCNJ1P48048 391 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 CDKN1CP49918 316 aaPredicted RBP9.31□□□□□ -0.92
USP15-208ENST00000548524 BASP1P80723 227 aaKnown RBP9.31□□□□□ -0.92
USP15-208ENST00000548524 CACNG1Q06432 222 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 VAC14Q08AM6 782 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 CLN3Q13286 438 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 SEMA5AQ13591 1074 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 GPR18Q14330 331 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 KRT33BQ14525 404 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 PLCL1Q15111 1095 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 RPE65Q16518 533 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 METRNLQ641Q3 311 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 ZNF449Q6P9G9 518 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 C4orf22Q6V702 233 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 GPR155Q7Z3F1 870 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 ZFAND4Q86XD8 727 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 CFAP206Q8IYR0 622 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 GLIS1Q8NBF1 620 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 HM13Q8TCT9 377 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 ART4Q93070 314 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 LINC00615Q96LM1 132 aaPredicted RBP9.31□□□□□ -0.92
USP15-208ENST00000548524 C12orf66Q96MD2 445 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 TGM7Q96PF1 710 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 TTC1Q99614 292 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 WWP1Q9H0M0 922 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 PRORYQ9H606 182 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 VPS37BQ9H9H4 285 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 SLC40A1Q9NP59 571 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 IMP3Q9NV31 184 aaKnown RBP9.31□□□□□ -0.92
USP15-208ENST00000548524 SMARCAL1Q9NZC9 954 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 FOXJ2Q9P0K8 574 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 PDP2Q9P2J9 529 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 ACSL5Q9ULC5 683 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 JRKLQ9Y4A0 524 aa9.31□□□□□ -0.92
USP15-208ENST00000548524 CFAP20Q9Y6A4 193 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms