RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 LRFN5Q96NI6 719 aa8.8□□□□□ -1
VPS13D-212ENST00000543766 CYP2S1Q96SQ9 504 aa8.8□□□□□ -1
VPS13D-212ENST00000543766 BEX2Q9BXY8 128 aa8.8□□□□□ -1
VPS13D-212ENST00000543766 NFKBIZQ9BYH8 718 aa8.8□□□□□ -1
VPS13D-212ENST00000543766 ZC3H12CQ9C0D7 883 aaKnown RBP8.8□□□□□ -1
VPS13D-212ENST00000543766 OR10A4Q9H209 315 aa8.8□□□□□ -1
VPS13D-212ENST00000543766 ZNF768Q9H5H4 540 aaKnown RBP8.8□□□□□ -1
VPS13D-212ENST00000543766 CHRAC1Q9NRG0 131 aa8.8□□□□□ -1
VPS13D-212ENST00000543766 TAS2R3Q9NYW6 316 aa8.8□□□□□ -1
VPS13D-212ENST00000543766 NCDNQ9UBB6 729 aa8.8□□□□□ -1
VPS13D-212ENST00000543766 AAR2Q9Y312 384 aaKnown RBP8.8□□□□□ -1
VPS13D-212ENST00000543766 BCLAF3A2AJT9 711 aaKnown RBP8.79□□□□□ -1
VPS13D-212ENST00000543766 OR5K3A6NET4 321 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 TBX1O43435 398 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 PEX10O60683 326 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 USP17L8P0C7I0 530 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 GLRA2P23416 452 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 CHMP24386 653 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 FOXN2P32314 431 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 EIF2DP41214 584 aaKnown RBP8.79□□□□□ -1
VPS13D-212ENST00000543766 GNPDA1P46926 289 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 KCNJ1P48048 391 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 CSNK1DP48730 415 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 TAS2R60P59551 318 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 NAE1Q13564 534 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 HFEQ30201 348 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 IRAK1BP1Q5VVH5 260 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 DCLRE1AQ6PJP8 1040 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 SMIM15Q7Z3B0 74 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 RAB44Q7Z6P3 723 aaPredicted RBP8.79□□□□□ -1
VPS13D-212ENST00000543766 CKAP2Q8WWK9 683 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 ST8SIA4Q92187 359 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 SGTBQ96EQ0 304 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 RILPQ96NA2 401 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.79□□□□□ -1
VPS13D-212ENST00000543766 HIPK2Q9H2X6 1198 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 XPNPEP1Q9NQW7 623 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 EIF2B3Q9NR50 452 aaKnown RBP8.79□□□□□ -1
VPS13D-212ENST00000543766 SLC22A11Q9NSA0 550 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 PTTG3PQ9NZH4 202 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 LY75O60449 1722 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 TARM1B6A8C7 271 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 NEDD8-MDP1E9PL57 170 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 PSMD12O00232 456 aaPredicted RBP8.79□□□□□ -1
VPS13D-212ENST00000543766 PODXLO00592 558 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 BUD23O43709 281 aaKnown RBP8.79□□□□□ -1
VPS13D-212ENST00000543766 EIF1BO60739 113 aaKnown RBP8.79□□□□□ -1
VPS13D-212ENST00000543766 C9P02748 559 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 ERBB2P04626 1255 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 OR52Z1P0C646 297 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 ZNF8P17098 575 aaPredicted RBP8.79□□□□□ -1
VPS13D-212ENST00000543766 MARK3P27448 753 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 EIF1P41567 113 aaKnown RBP8.79□□□□□ -1
VPS13D-212ENST00000543766 GRIA2P42262 883 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 GPR4P46093 362 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 RAB4BP61018 213 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 ABCE1P61221 599 aaKnown RBP8.79□□□□□ -1
VPS13D-212ENST00000543766 KLRC3Q07444 240 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 TAF2Q6P1X5 1199 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 SZRD1Q7Z422 152 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 ZFPM1Q8IX07 1006 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 ADGRG2Q8IZP9 1017 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 CALML4Q96GE6 196 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 ILKAPQ9H0C8 392 aaPredicted RBP8.79□□□□□ -1
VPS13D-212ENST00000543766 KLHL1Q9NR64 748 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 ARHGEF4Q9NR80 690 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 HAO1Q9UJM8 370 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 ANKRD36CQ5JPF3 1778 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 TRIM49BA6NDI0 452 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 KIAA0355O15063 1070 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 EPHB6O15197 1021 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 KLRC4O43908 158 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 PPM1BO75688 479 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 UQCRFS1P1P0C7P4 283 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 RALAP11233 206 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 SHMT2P34897 504 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 GANABQ14697 944 aaKnown RBP8.79□□□□□ -1
VPS13D-212ENST00000543766 PRAMEF19Q5SWL8 479 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 GPR158Q5T848 1215 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 ARHGAP40Q5TG30 622 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 CYS1Q717R9 158 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 RD3Q7Z3Z2 195 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 LRRC17Q8N6Y2 441 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 IL17RCQ8NAC3 791 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 PYDC1Q8WXC3 89 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 FOXRED1Q96CU9 486 aaPredicted RBP8.79□□□□□ -1
VPS13D-212ENST00000543766 PGAP3Q96FM1 320 aaPredicted RBP8.79□□□□□ -1
VPS13D-212ENST00000543766 SEMA6AQ9H2E6 1030 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 OSGEPQ9NPF4 335 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 PNPLA3Q9NST1 481 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 TMEM260Q9NX78 707 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 ING3Q9NXR8 418 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 VAPAQ9P0L0 249 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 MGAT4AQ9UM21 535 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 RIPK3Q9Y572 518 aa8.79□□□□□ -1
VPS13D-212ENST00000543766 TPP1O14773 563 aa8.78□□□□□ -1
VPS13D-212ENST00000543766 VEGFDO43915 354 aa8.78□□□□□ -1
VPS13D-212ENST00000543766 BMPR1AP36894 532 aa8.78□□□□□ -1
VPS13D-212ENST00000543766 GPX4P36969 197 aaPredicted RBP8.78□□□□□ -1
VPS13D-212ENST00000543766 CHIT1Q13231 466 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms