RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 HHEXQ03014 270 aa12.22□□□□□ -0.45
PRKDC-207ENST00000536483 NFATC2Q13469 925 aa12.22□□□□□ -0.45
PRKDC-207ENST00000536483 CCNG2Q16589 344 aa12.22□□□□□ -0.45
PRKDC-207ENST00000536483 ZNF648Q5T619 568 aaPredicted RBP12.22□□□□□ -0.45
PRKDC-207ENST00000536483 GPRC6AQ5T6X5 926 aa12.22□□□□□ -0.45
PRKDC-207ENST00000536483 WDR74Q6RFH5 385 aaPredicted RBP12.22□□□□□ -0.45
PRKDC-207ENST00000536483 ARHGEF18Q6ZSZ5 1173 aa12.22□□□□□ -0.45
PRKDC-207ENST00000536483 ARHGAP22Q7Z5H3 698 aa12.22□□□□□ -0.45
PRKDC-207ENST00000536483 SLC9B2Q86UD5 537 aa12.22□□□□□ -0.45
PRKDC-207ENST00000536483 UNC5BQ8IZJ1 945 aa12.22□□□□□ -0.45
PRKDC-207ENST00000536483 NLGN4XQ8N0W4 816 aa12.22□□□□□ -0.45
PRKDC-207ENST00000536483 NLGN4YQ8NFZ3 816 aaPredicted RBP12.22□□□□□ -0.45
PRKDC-207ENST00000536483 OR4K2Q8NGD2 314 aa12.22□□□□□ -0.45
PRKDC-207ENST00000536483 NCSTNQ92542 709 aa12.22□□□□□ -0.45
PRKDC-207ENST00000536483 SLC45A3Q96JT2 553 aa12.22□□□□□ -0.45
PRKDC-207ENST00000536483 LINC00615Q96LM1 132 aaPredicted RBP12.22□□□□□ -0.45
PRKDC-207ENST00000536483 CATSPER2Q96P56 530 aa12.22□□□□□ -0.45
PRKDC-207ENST00000536483 ALS2CR12Q96Q35 445 aa12.22□□□□□ -0.45
PRKDC-207ENST00000536483 TEFMQ96QE5 360 aaKnown RBP12.22□□□□□ -0.45
PRKDC-207ENST00000536483 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.22□□□□□ -0.45
PRKDC-207ENST00000536483 SPRY4Q9C004 299 aa12.22□□□□□ -0.45
PRKDC-207ENST00000536483 EPN3Q9H201 632 aa12.22□□□□□ -0.45
PRKDC-207ENST00000536483 GPN2Q9H9Y4 310 aaPredicted RBP12.22□□□□□ -0.45
PRKDC-207ENST00000536483 UGT1A7Q9HAW7 530 aa12.22□□□□□ -0.45
PRKDC-207ENST00000536483 UGT1A10Q9HAW8 530 aa12.22□□□□□ -0.45
PRKDC-207ENST00000536483 UGT1A8Q9HAW9 530 aa12.22□□□□□ -0.45
PRKDC-207ENST00000536483 APMAPQ9HDC9 416 aa12.22□□□□□ -0.45
PRKDC-207ENST00000536483 RRAGDQ9NQL2 400 aaPredicted RBP12.22□□□□□ -0.45
PRKDC-207ENST00000536483 ZNF71Q9NQZ8 489 aaPredicted RBP12.22□□□□□ -0.45
PRKDC-207ENST00000536483 KLC4Q9NSK0 619 aa12.22□□□□□ -0.45
PRKDC-207ENST00000536483 RIMKLBQ9ULI2 386 aa12.22□□□□□ -0.45
PRKDC-207ENST00000536483 KCNK6Q9Y257 313 aa12.22□□□□□ -0.45
PRKDC-207ENST00000536483 IGLV3-16A0A075B6K0 115 aa12.21□□□□□ -0.45
PRKDC-207ENST00000536483 TRBV5-4A0A0C4DH59 114 aa12.21□□□□□ -0.45
PRKDC-207ENST00000536483 MROH6A6NGR9 719 aa12.21□□□□□ -0.45
PRKDC-207ENST00000536483 CAPN5O15484 640 aaPredicted RBP12.21□□□□□ -0.45
PRKDC-207ENST00000536483 NRDCO43847 1150 aa12.21□□□□□ -0.45
PRKDC-207ENST00000536483 SRP72O76094 671 aaKnown RBP12.21□□□□□ -0.45
PRKDC-207ENST00000536483 PRAMEF1O95521 474 aa12.21□□□□□ -0.45
PRKDC-207ENST00000536483 MAP4P27816 1152 aaKnown RBP12.21□□□□□ -0.45
PRKDC-207ENST00000536483 FDFT1P37268 417 aa12.21□□□□□ -0.45
PRKDC-207ENST00000536483 MAPK9P45984 424 aa12.21□□□□□ -0.45
PRKDC-207ENST00000536483 OLIG2Q13516 323 aa12.21□□□□□ -0.45
PRKDC-207ENST00000536483 GPR33Q49SQ1 333 aa12.21□□□□□ -0.45
PRKDC-207ENST00000536483 FAM151BQ6UXP7 276 aa12.21□□□□□ -0.45
PRKDC-207ENST00000536483 CEACAM20Q6UY09 585 aa12.21□□□□□ -0.45
PRKDC-207ENST00000536483 TIPARPQ7Z3E1 657 aaKnown RBP12.21□□□□□ -0.45
PRKDC-207ENST00000536483 LINC00523Q86TU6 105 aa12.21□□□□□ -0.45
PRKDC-207ENST00000536483 RBM12BQ8IXT5 1001 aaKnown RBP12.21□□□□□ -0.45
PRKDC-207ENST00000536483 RASGEF1AQ8N9B8 481 aa12.21□□□□□ -0.45
PRKDC-207ENST00000536483 HEXDCQ8WVB3 486 aa12.21□□□□□ -0.45
PRKDC-207ENST00000536483 MAIP1Q8WWC4 291 aa12.21□□□□□ -0.45
PRKDC-207ENST00000536483 KIAA1143Q96AT1 154 aaPredicted RBP12.21□□□□□ -0.45
PRKDC-207ENST00000536483 APOL2Q9BQE5 337 aa12.21□□□□□ -0.45
PRKDC-207ENST00000536483 ARFGAP3Q9NP61 516 aa12.21□□□□□ -0.45
PRKDC-207ENST00000536483 PRDM8Q9NQV8 689 aa12.21□□□□□ -0.45
PRKDC-207ENST00000536483 CPNE7Q9UBL6 633 aa12.21□□□□□ -0.45
PRKDC-207ENST00000536483 KLHL3Q9UH77 587 aa12.21□□□□□ -0.45
PRKDC-207ENST00000536483 TUBD1Q9UJT1 453 aa12.21□□□□□ -0.45
PRKDC-207ENST00000536483 PPP2R2CQ9Y2T4 447 aa12.21□□□□□ -0.45
PRKDC-207ENST00000536483 KCTD3Q9Y597 815 aa12.21□□□□□ -0.45
PRKDC-207ENST00000536483 FLNCQ14315 2725 aa12.21□□□□□ -0.46
PRKDC-207ENST00000536483 SPENQ96T58 3664 aaKnown RBP12.2□□□□□ -0.46
PRKDC-207ENST00000536483 BUD23O43709 281 aaKnown RBP12.2□□□□□ -0.46
PRKDC-207ENST00000536483 SGTAO43765 313 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 SNX2O60749 519 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 MTX2O75431 263 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 SLC4A1P02730 911 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 BRAFP15056 766 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 VCLP18206 1134 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 IDSP22304 550 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 SLC19A1P41440 591 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 CTSCP53634 463 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 SEMA5AQ13591 1074 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 PTPRCAPQ14761 206 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 IGFBP7Q16270 282 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 LONRF2Q1L5Z9 754 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 BCL7AQ4VC05 210 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 METRNLQ641Q3 311 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 C4orf22Q6V702 233 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 SNX20Q7Z614 316 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 AMZ2Q86W34 360 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 STYXQ8WUJ0 223 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 ATG4AQ8WYN0 398 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 PEX13Q92968 403 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 ULK4Q96C45 1275 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 SGSM3Q96HU1 749 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 TTC25Q96NG3 672 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 STN1Q9H668 368 aaKnown RBP12.2□□□□□ -0.46
PRKDC-207ENST00000536483 ASB8Q9H765 288 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 LZTFL1Q9NQ48 299 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 FBXO8Q9NRD0 319 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 HOMER3Q9NSC5 361 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 POT1Q9NUX5 634 aa12.2□□□□□ -0.46
PRKDC-207ENST00000536483 NLE1Q9NVX2 485 aaPredicted RBP12.2□□□□□ -0.46
PRKDC-207ENST00000536483 SCHIP1Q9P0W5 487 aaPredicted RBP12.2□□□□□ -0.46
PRKDC-207ENST00000536483 ZNF624Q9P2J8 865 aaPredicted RBP12.2□□□□□ -0.46
PRKDC-207ENST00000536483 C17orf113A0A1B0GUU1 675 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 POLR1CO15160 346 aaPredicted RBP12.19□□□□□ -0.46
PRKDC-207ENST00000536483 POP7O75817 140 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms