RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 TPH1P17752 444 aa13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 CDC25BP30305 580 aa13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 ZNF140P52738 457 aaPredicted RBP13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 GDF10P55107 478 aa13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 PPP1CAP62136 330 aa13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 XIAPP98170 497 aa13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 PDE1BQ01064 536 aa13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 MSLNQ13421 630 aaPredicted RBP13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 PLCL1Q15111 1095 aa13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 TBR1Q16650 682 aa13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 PARP6Q2NL67 630 aa13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 CACHD1Q5VU97 1274 aa13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 DUS1LQ6P1R4 473 aaKnown RBP13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 TIPARPQ7Z3E1 657 aaKnown RBP13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 PIAS4Q8N2W9 510 aaPredicted RBP13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 ZDHHC12Q96GR4 267 aa13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 ZNF514Q96K75 400 aaPredicted RBP13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 OR6C1Q96RD1 312 aa13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 TMEM121Q9BTD3 319 aa13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 ZNF768Q9H5H4 540 aaKnown RBP13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 GPN2Q9H9Y4 310 aaPredicted RBP13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 PIH1D1Q9NWS0 290 aaKnown RBP13.99□□□□□ -0.17
RTN3P1-201ENST00000536295 LOC101059948A0A1B0GTJ6 334 aa13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 ZNF189O75820 626 aaPredicted RBP13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 POLBP06746 335 aa13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 RALBP11234 206 aa13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 MTHFD1P11586 935 aaKnown RBP13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 ITGALP20701 1170 aa13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 MAP4P27816 1152 aaKnown RBP13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 MC4RP32245 332 aa13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 KLF1Q13351 362 aaPredicted RBP13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 SEPT6Q14141 434 aa13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 ZRANB3Q5FWF4 1079 aa13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 METRNLQ641Q3 311 aa13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 PRSS42Q7Z5A4 293 aa13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 SPDYE1Q8NFV5 336 aaPredicted RBP13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 OR2L2Q8NH16 312 aa13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 ATG4AQ8WYN0 398 aa13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 KIAA1143Q96AT1 154 aaPredicted RBP13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 ULK4Q96C45 1275 aa13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 DNAJC1Q96KC8 554 aaKnown RBP13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 C12orf66Q96MD2 445 aa13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 INSM2Q96T92 566 aaPredicted RBP13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 SLC12A9Q9BXP2 914 aa13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 ULBP3Q9BZM4 244 aa13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 SPRY4Q9C004 299 aa13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 FEZ2Q9UHY8 353 aaPredicted RBP13.98□□□□□ -0.17
RTN3P1-201ENST00000536295 CCDC78A2IDD5 438 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 GOLGA6L6A8MZA4 724 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 B8ZZF3 427 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 TOX3O15405 576 aaPredicted RBP13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 LDB2O43679 373 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 SGTAO43765 313 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 SLC35G4P0C7Q5 338 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 PRKAR1AP10644 381 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 ZNF28P17035 718 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 HADHAP40939 763 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 CDKN1CP49918 316 aaPredicted RBP13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 NFATC3Q12968 1075 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 GSE1Q14687 1217 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 POU6F1Q14863 301 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 BCL7AQ4VC05 210 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 KCTD11Q693B1 232 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 TAS2R42Q7RTR8 314 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 SNX20Q7Z614 316 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 RASGRP3Q8IV61 690 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 CFAP206Q8IYR0 622 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 NXPE1Q8N323 547 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 LILRA3Q8N6C8 439 aaPredicted RBP13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 SLC35B2Q8TB61 432 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 HES6Q96HZ4 224 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 COPS8Q99627 209 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 LRRC40Q9H9A6 602 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 ARNT2Q9HBZ2 717 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 GUCA1BQ9UMX6 200 aa13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 TMEM184BQ9Y519 407 aaPredicted RBP13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 ZNF106Q9H2Y7 1883 aaKnown RBP13.97□□□□□ -0.17
RTN3P1-201ENST00000536295 ZNF891A8MT65 544 aaPredicted RBP13.96□□□□□ -0.17
RTN3P1-201ENST00000536295 CFAP99D6REC4 459 aa13.96□□□□□ -0.17
RTN3P1-201ENST00000536295 NKX2-8O15522 239 aa13.96□□□□□ -0.17
RTN3P1-201ENST00000536295 ZIC2O95409 532 aaPredicted RBP13.96□□□□□ -0.17
RTN3P1-201ENST00000536295 DLGAP3O95886 979 aa13.96□□□□□ -0.17
RTN3P1-201ENST00000536295 PRSS56P0CW18 603 aa13.96□□□□□ -0.17
RTN3P1-201ENST00000536295 ATP1B2P14415 290 aaPredicted RBP13.96□□□□□ -0.17
RTN3P1-201ENST00000536295 KRT33BQ14525 404 aa13.96□□□□□ -0.17
RTN3P1-201ENST00000536295 P3H1Q32P28 736 aa13.96□□□□□ -0.17
RTN3P1-201ENST00000536295 SEL1L2Q5TEA6 688 aa13.96□□□□□ -0.17
RTN3P1-201ENST00000536295 KLHL35Q6PF15 583 aa13.96□□□□□ -0.17
RTN3P1-201ENST00000536295 KLHDC8BQ8IXV7 354 aa13.96□□□□□ -0.17
RTN3P1-201ENST00000536295 KLHL6Q8WZ60 621 aa13.96□□□□□ -0.17
RTN3P1-201ENST00000536295 RMDN2Q96LZ7 410 aa13.96□□□□□ -0.17
RTN3P1-201ENST00000536295 TRIT1Q9H3H1 467 aaKnown RBP13.96□□□□□ -0.17
RTN3P1-201ENST00000536295 EPHA6Q9UF33 1036 aa13.96□□□□□ -0.17
RTN3P1-201ENST00000536295 IL17BQ9UHF5 180 aa13.96□□□□□ -0.17
RTN3P1-201ENST00000536295 ACSL5Q9ULC5 683 aa13.96□□□□□ -0.17
RTN3P1-201ENST00000536295 GCN1Q92616 2671 aaKnown RBP13.96□□□□□ -0.18
RTN3P1-201ENST00000536295 IGHV5-51A0A0C4DH38 117 aa13.95□□□□□ -0.18
RTN3P1-201ENST00000536295 OR6C74A6NCV1 312 aa13.95□□□□□ -0.18
RTN3P1-201ENST00000536295 AGAP14A8MT82 685 aa13.95□□□□□ -0.18
RTN3P1-201ENST00000536295 PYCARD-AS1I3L0S3 204 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms