RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 MPP1Q00013 466 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 CUL1Q13616 776 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 NR0B2Q15466 257 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 SEPT7Q16181 437 aaKnown RBP11.84□□□□□ -0.51
CHD4-203ENST00000535717 C14orf28Q4W4Y0 310 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 CTSL3PQ5NE16 218 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 METRNLQ641Q3 311 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 GUSBP11Q6P575 273 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 IYDQ6PHW0 289 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 CAPN12Q6ZSI9 719 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 LRRC6Q86X45 466 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 CNTN4Q8IWV2 1026 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 PALM2Q8IXS6 379 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 CFAP206Q8IYR0 622 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 LILRA3Q8N6C8 439 aaPredicted RBP11.84□□□□□ -0.51
CHD4-203ENST00000535717 C2CD4AQ8NCU7 369 aaPredicted RBP11.84□□□□□ -0.51
CHD4-203ENST00000535717 GSDMBQ8TAX9 411 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 HM13Q8TCT9 377 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 LKAAEAR1Q8TD35 194 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 CALML6Q8TD86 181 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 C9orf72Q96LT7 481 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 BIRC8Q96P09 236 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 VPS37BQ9H9H4 285 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 PPANQ9NQ55 473 aaKnown RBP11.84□□□□□ -0.51
CHD4-203ENST00000535717 FBXO6Q9NRD1 293 aaPredicted RBP11.84□□□□□ -0.51
CHD4-203ENST00000535717 INTS10Q9NVR2 710 aaKnown RBP11.84□□□□□ -0.51
CHD4-203ENST00000535717 TOR4AQ9NXH8 423 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 MOCS1Q9NZB8 636 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 SCHIP1Q9P0W5 487 aaPredicted RBP11.84□□□□□ -0.51
CHD4-203ENST00000535717 SLC17A6Q9P2U8 582 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 MTRF1LQ9UGC7 380 aaKnown RBP11.84□□□□□ -0.51
CHD4-203ENST00000535717 PADI4Q9UM07 663 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 NFU1Q9UMS0 254 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 CRYL1Q9Y2S2 319 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 CACNA1AO00555 2505 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 C17orf113A0A1B0GUU1 675 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 CPED1A4D0V7 1026 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 IQCF5A8MTL0 148 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 PDZK1P1A8MUH7 402 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 PFDN6O15212 129 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 HAUS5O94927 633 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 SLU7O95391 586 aaKnown RBP11.83□□□□□ -0.52
CHD4-203ENST00000535717 FTH1P02794 183 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 GSTM1P09488 218 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 F3P13726 295 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 ITGB6P18564 788 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 ACP1P24666 158 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 FMO4P31512 558 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 ACADVLP49748 655 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 DUSP3P51452 185 aaPredicted RBP11.83□□□□□ -0.52
CHD4-203ENST00000535717 ADARP55265 1226 aaKnown RBP11.83□□□□□ -0.52
CHD4-203ENST00000535717 GPX6P59796 221 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 GSTM4Q03013 218 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 MGAT5Q09328 741 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 TEDDM1Q5T9Z0 273 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 AGAP9Q5VTM2 703 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 PTRHD1Q6GMV3 140 aaKnown RBP11.83□□□□□ -0.52
CHD4-203ENST00000535717 CNSTQ6PJW8 725 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 ABRAXAS1Q6UWZ7 409 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 WASH2PQ6VEQ5 465 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 SLCO6A1Q86UG4 719 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 KRT222Q8N1A0 295 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 SFRP1Q8N474 314 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 ARL14Q8N4G2 192 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 SLC37A2Q8TED4 501 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 FMO2Q99518 471 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 LRRC4CQ9HCJ2 640 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 WASH6PQ9NQA3 447 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 GNPTGQ9UJJ9 305 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 ACSL5Q9ULC5 683 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 PSMD13Q9UNM6 376 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 VPS9D1Q9Y2B5 631 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 WDR37Q9Y2I8 494 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 RNF215Q9Y6U7 377 aa11.83□□□□□ -0.52
CHD4-203ENST00000535717 ASXL3Q9C0F0 2248 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 KIR2DS5A0A0G2JLQ3 304 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 A0A0G2JNG1 304 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 EME2A4GXA9 379 aaPredicted RBP11.82□□□□□ -0.52
CHD4-203ENST00000535717 F8W8V4 182 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 KIR2DS3K7RE56 304 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 TRIM16O95361 564 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 ESR1P03372 595 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 GSTA2P09210 222 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 FTH1P19P0C7X4 201 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 SLC2A4P14672 509 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 GABRB3P28472 473 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 CCR7P32248 378 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 PREPP48147 710 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 LEPRP48357 1165 aaKnown RBP11.82□□□□□ -0.52
CHD4-203ENST00000535717 KIR2DS5Q14953 304 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 CLCA4Q14CN2 919 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 CCDC157Q569K6 752 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 PPM1JQ5JR12 505 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 PERM1Q5SV97 790 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 ZNF549Q6P9A3 640 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 NAPRTQ6XQN6 538 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 KIAA0408Q6ZU52 694 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 CEP128Q6ZU80 1094 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 C3orf62Q6ZUJ4 267 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 EFL1Q7Z2Z2 1120 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms