RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 SEZ6LQ9BYH1 1024 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 COQ10BQ9H8M1 238 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 EIF2B3Q9NR50 452 aaKnown RBP12.1□□□□□ -0.47
BDNF-218ENST00000533246 GDAP2Q9NXN4 497 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 A8MT66 165 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 SNPHO15079 494 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 FFAR2O15552 330 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 ACRP10323 421 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 KCNE1P15382 129 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 TNK2Q07912 1038 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 MYLK3Q32MK0 819 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 ARMC6Q6NXE6 501 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 AGMOQ6ZNB7 445 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 CHPFQ8IZ52 775 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 OR10Q1Q8NGQ4 319 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 CANT1Q8WVQ1 401 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 MTERF3Q96E29 417 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 KCNA7Q96RP8 456 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 BRD7Q9NPI1 651 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 COPG1Q9Y678 874 aaKnown RBP12.09□□□□□ -0.47
BDNF-218ENST00000533246 BMP10O95393 424 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 CYP2A6P11509 494 aaPredicted RBP12.09□□□□□ -0.47
BDNF-218ENST00000533246 ITGAXP20702 1163 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 PRKCQQ04759 706 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 PCLAFQ15004 111 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 PLA2G4EQ3MJ16 856 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 SIRPB2Q5JXA9 342 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 SFRP1Q8N474 314 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 HAPLN3Q96S86 360 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 AARSD1Q9BTE6 412 aaKnown RBP12.09□□□□□ -0.47
BDNF-218ENST00000533246 MRPS26Q9BYN8 205 aaKnown RBP12.09□□□□□ -0.47
BDNF-218ENST00000533246 ZCCHC2Q9C0B9 1178 aaKnown RBP12.09□□□□□ -0.47
BDNF-218ENST00000533246 UNC93B1Q9H1C4 597 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 RAB23Q9ULC3 237 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 GMPPBQ9Y5P6 360 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 A0A0D9SEW6 157 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 E7ENX8 843 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 ANXA6P08133 673 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 COL6A1P12109 1028 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 CCND3P30281 292 aaPredicted RBP12.09□□□□□ -0.47
BDNF-218ENST00000533246 GKP32189 559 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 IL10RBQ08334 325 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 LDLRAP1Q5SW96 308 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 TTC23Q5W5X9 447 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 ABRAXAS1Q6UWZ7 409 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 RFPL4BQ6ZWI9 263 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 OR7G1Q8NGA0 311 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 SIPA1Q96FS4 1042 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 MAGEB10Q96LZ2 347 aaPredicted RBP12.09□□□□□ -0.47
BDNF-218ENST00000533246 MTERF1Q99551 399 aaKnown RBP12.09□□□□□ -0.47
BDNF-218ENST00000533246 EBPLQ9BY08 206 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 NFKBIZQ9BYH8 718 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 MAGEH1Q9H213 219 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 LRTM1Q9HBL6 345 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 PMF1-BGLAPU3KQ54 211 aa12.09□□□□□ -0.47
BDNF-218ENST00000533246 ELFN1P0C7U0 828 aa12.08□□□□□ -0.47
BDNF-218ENST00000533246 VARSP26640 1264 aaKnown RBP12.08□□□□□ -0.47
BDNF-218ENST00000533246 DGKQP52824 942 aa12.08□□□□□ -0.47
BDNF-218ENST00000533246 NKX2-5P52952 324 aaPredicted RBP12.08□□□□□ -0.47
BDNF-218ENST00000533246 MADCAM1Q13477 382 aa12.08□□□□□ -0.47
BDNF-218ENST00000533246 XKR5Q6UX68 686 aa12.08□□□□□ -0.47
BDNF-218ENST00000533246 MTSS1LQ765P7 747 aa12.08□□□□□ -0.47
BDNF-218ENST00000533246 ALDH16A1Q8IZ83 802 aa12.08□□□□□ -0.47
BDNF-218ENST00000533246 CNTD1Q8N815 330 aa12.08□□□□□ -0.47
BDNF-218ENST00000533246 OR2T34Q8NGX1 318 aa12.08□□□□□ -0.47
BDNF-218ENST00000533246 OR2T3Q8NH03 318 aa12.08□□□□□ -0.47
BDNF-218ENST00000533246 HTRA1Q92743 480 aa12.08□□□□□ -0.47
BDNF-218ENST00000533246 FARSBQ9NSD9 589 aaKnown RBP12.08□□□□□ -0.47
BDNF-218ENST00000533246 AHSPQ9NZD4 102 aa12.08□□□□□ -0.47
BDNF-218ENST00000533246 C3orf18Q9UK00 162 aa12.08□□□□□ -0.47
BDNF-218ENST00000533246 CDV3Q9UKY7 258 aaKnown RBP12.08□□□□□ -0.47
BDNF-218ENST00000533246 GABRQQ9UN88 632 aa12.08□□□□□ -0.47
BDNF-218ENST00000533246 SLC38A8A6NNN8 435 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 A8MU76 341 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 ICMTO60725 284 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 XYLBO75191 536 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 CCNKO75909 580 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 IFNA14P01570 189 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 ADH1AP07327 375 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 HAPLN1P10915 354 aaPredicted RBP12.08□□□□□ -0.48
BDNF-218ENST00000533246 IFI30P13284 250 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 PPP2R1BP30154 601 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 MAPK9P45984 424 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 TCEAL1Q15170 157 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 FAM174BQ3ZCQ3 159 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 DUS1LQ6P1R4 473 aaKnown RBP12.08□□□□□ -0.48
BDNF-218ENST00000533246 TMPRSS11BQ86T26 416 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 ZNF540Q8NDQ6 660 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 OR52J3Q8NH60 311 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 OSBPL11Q9BXB4 747 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 SACM1LQ9NTJ5 587 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 NOX1Q9Y5S8 564 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 IGKV6-21A0A0C4DH24 114 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 PNMA8CA0A1B0GUJ8 204 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 FAM25AB3EWG3 89 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 FAM25CB3EWG5 89 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 FAM25GB3EWG6 89 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 FTH1P02794 183 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 INHAP05111 366 aa12.08□□□□□ -0.48
BDNF-218ENST00000533246 DLG1Q12959 904 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms