RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 ING2Q9H160 280 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 KCTD10Q9H3F6 313 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 RANBP3Q9H6Z4 567 aaPredicted RBP5.75□□□□□ -1.49
CD44-225ENST00000527326 KAT8Q9H7Z6 458 aaKnown RBP5.75□□□□□ -1.49
CD44-225ENST00000527326 CYP3A43Q9HB55 503 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 NMUR1Q9HB89 426 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 RANGRFQ9HD47 186 aaPredicted RBP5.75□□□□□ -1.49
CD44-225ENST00000527326 CASS4Q9NQ75 786 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 BIN3Q9NQY0 253 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 AGPAT4Q9NRZ5 378 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 CCM2LQ9NUG4 571 aaPredicted RBP5.75□□□□□ -1.49
CD44-225ENST00000527326 BLOC1S4Q9NUP1 217 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 SETD4Q9NVD3 440 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 ERAP1Q9NZ08 941 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 TMEM181Q9P2C4 612 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 LAMP5Q9UJQ1 280 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 AJAP1Q9UKB5 411 aaPredicted RBP5.75□□□□□ -1.49
CD44-225ENST00000527326 SARDHQ9UL12 918 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 ZNRF3Q9ULT6 936 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 PLCL2Q9UPR0 1127 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 RPH3AQ9Y2J0 694 aaPredicted RBP5.75□□□□□ -1.49
CD44-225ENST00000527326 KCNK7Q9Y2U2 307 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 PCDHGB6Q9Y5F9 930 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 PSAT1Q9Y617 370 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 PXDNQ92626 1479 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 GLI3P10071 1580 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 TANC1Q9C0D5 1861 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 CICQ96RK0 1608 aaPredicted RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 TJP1Q07157 1748 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 LOC390937A0A1W2PQ73 354 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 E2F8A0AVK6 867 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 PMS2P1A4D2B8 440 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 CCDC154A6NI56 674 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 CLDN24A6NM45 220 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 A8MV72 311 aaPredicted RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 STMND1H3BQB6 276 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 SNAP23O00161 211 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 PSMD9O00233 223 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 PDXKO00764 312 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 ZNF195O14628 629 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 NUPL2O15504 423 aaKnown RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 LIASO43766 372 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 ZBTB14O43829 449 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 TBC1D4O60343 1298 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 GLRA3O75311 464 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 NDUFS6O75380 124 aaKnown RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 TIPRLO75663 272 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 RFPL3O75679 317 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 ZMPSTE24O75844 475 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 HTR3BO95264 441 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 IFNA7P01567 189 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 ANXA1P04083 346 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 S100A8P05109 93 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 HBQ1P09105 142 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 WEE2P0C1S8 567 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 RRASP10301 218 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 CYP2C8P10632 490 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 FGF3P11487 239 aaPredicted RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 POU3F3P20264 500 aaPredicted RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 CYP7A1P22680 504 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 S100PP25815 95 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 CNTFP26441 200 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 SSTR1P30872 391 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 CD68P34810 354 aaPredicted RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 NUP62P37198 522 aaPredicted RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 SLC15A1P46059 708 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 CCR10P46092 362 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 FNTBP49356 437 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 ERVFC1P60507 584 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 PSME3P61289 254 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 TIMM10P62072 90 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 RNF4P78317 190 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 MRPS5P82675 430 aaKnown RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 ALDH6A1Q02252 535 aaKnown RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 CREMQ03060 361 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 GRAPQ13588 217 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 LLGL1Q15334 1064 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 LRRC41Q15345 812 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 KNOP1Q1ED39 458 aaKnown RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 AAK1Q2M2I8 961 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 FASTKD1Q53R41 847 aaKnown RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 ARMCX4Q5H9R4 360 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 DCAF17Q5H9S7 520 aaPredicted RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 SAMD4BQ5PRF9 694 aaKnown RBP5.74□□□□□ -1.49
CD44-225ENST00000527326 HYIQ5T013 277 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 TPRG1LQ5T0D9 272 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 KIAA1614Q5VZ46 1190 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 TMEM236Q5W0B7 351 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 TTC23Q5W5X9 447 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 CES4AQ5XG92 561 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 ELP2Q6IA86 826 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 TAF2Q6P1X5 1199 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 LIPIQ6XZB0 460 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 TIFABQ6ZNK6 161 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 STRADAQ7RTN6 431 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 MAVSQ7Z434 540 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 THAP5Q7Z6K1 395 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 STRA8Q7Z7C7 330 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 SLC51AQ86UW1 340 aa5.74□□□□□ -1.49
CD44-225ENST00000527326 C12orf40Q86WS4 652 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms