RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 NFE2L1Q14494 772 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 HLTFQ14527 1009 aaKnown RBP eCLIP12.69□□□□□ -0.38
SMPD1-202ENST00000526280 AGAP9Q5VTM2 703 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 ZNF470Q6ECI4 717 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 GUSBP11Q6P575 273 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 ABRAXAS1Q6UWZ7 409 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 XKR5Q6UX68 686 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 SLCO6A1Q86UG4 719 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 LRRC6Q86X45 466 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 DENND6AQ8IWF6 608 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 SFRP1Q8N474 314 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 ARL14Q8N4G2 192 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 HM13Q8TCT9 377 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 PATE1Q8WXA2 126 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 IFT81Q8WYA0 676 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 LPGAT1Q92604 370 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 CERS2Q96G23 380 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 FAM167BQ9BTA0 163 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 IARS2Q9NSE4 1012 aaKnown RBP12.69□□□□□ -0.38
SMPD1-202ENST00000526280 INTS10Q9NVR2 710 aaKnown RBP12.69□□□□□ -0.38
SMPD1-202ENST00000526280 ARGLU1Q9NWB6 273 aaPredicted RBP12.69□□□□□ -0.38
SMPD1-202ENST00000526280 FBXO5Q9UKT4 447 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 APOBEC2Q9Y235 224 aaKnown RBP12.69□□□□□ -0.38
SMPD1-202ENST00000526280 VPS9D1Q9Y2B5 631 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 PCDHGA1Q9Y5H4 931 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 SPTBN2O15020 2390 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 RP1P56715 2156 aa12.69□□□□□ -0.38
SMPD1-202ENST00000526280 TRBV23OR9-2A0A075B6M9 112 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 KIR2DS5A0A0G2JLQ3 304 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 A0A0G2JNG1 304 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 MED19A0JLT2 244 aaPredicted RBP12.68□□□□□ -0.38
SMPD1-202ENST00000526280 CPED1A4D0V7 1026 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 KIR2DS3K7RE56 304 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 FTH1P02794 183 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 GP1BAP07359 652 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 RHOXF2BP0C7M4 288 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 FTH1P19P0C7X4 201 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 SLC2A4P14672 509 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 BRAFP15056 766 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 GLB1P16278 677 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 RPL10P27635 214 aaKnown RBP12.68□□□□□ -0.38
SMPD1-202ENST00000526280 SLC1A2P43004 574 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 CARSP49589 748 aaKnown RBP12.68□□□□□ -0.38
SMPD1-202ENST00000526280 MAZP56270 477 aaKnown RBP12.68□□□□□ -0.38
SMPD1-202ENST00000526280 ILKQ13418 452 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 KIR2DS5Q14953 304 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 ZNF789Q5FWF6 425 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 TRMT10BQ6PF06 316 aaKnown RBP12.68□□□□□ -0.38
SMPD1-202ENST00000526280 EFL1Q7Z2Z2 1120 aaKnown RBP12.68□□□□□ -0.38
SMPD1-202ENST00000526280 CCDC25Q86WR0 208 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 CNTN4Q8IWV2 1026 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 PALM2Q8IXS6 379 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 CFAP206Q8IYR0 622 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 OR6C4Q8NGE1 309 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 GABPB2Q8TAK5 448 aaPredicted RBP12.68□□□□□ -0.38
SMPD1-202ENST00000526280 GSDMBQ8TAX9 411 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 IFI44Q8TCB0 444 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 NAT6Q93015 286 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 BIRC8Q96P09 236 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 RHOXF2Q9BQY4 288 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 MOCS1Q9NZB8 636 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 SCHIP1Q9P0W5 487 aaPredicted RBP12.68□□□□□ -0.38
SMPD1-202ENST00000526280 GNPTGQ9UJJ9 305 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 ACSL5Q9ULC5 683 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 WDR37Q9Y2I8 494 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 CRYL1Q9Y2S2 319 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 NCOR2Q9Y618 2525 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 SPEGQ15772 3267 aa12.68□□□□□ -0.38
SMPD1-202ENST00000526280 UBA6A0AVT1 1052 aaPredicted RBP12.67□□□□□ -0.38
SMPD1-202ENST00000526280 PDZK1P1A8MUH7 402 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 NUDT21O43809 227 aaKnown RBP12.67□□□□□ -0.38
SMPD1-202ENST00000526280 RFPL3O75679 317 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 ESR1P03372 595 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 PNLIPP16233 465 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 KCNA4P22459 653 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 ECHS1P30084 290 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 FMO4P31512 558 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 MAGEA4P43358 317 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 FASLGP48023 281 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 EIF3BP55884 814 aaKnown RBP12.67□□□□□ -0.38
SMPD1-202ENST00000526280 FOXK2Q01167 660 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 CUL1Q13616 776 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 CLCA4Q14CN2 919 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 SEPT7Q16181 437 aaKnown RBP12.67□□□□□ -0.38
SMPD1-202ENST00000526280 PERM1Q5SV97 790 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 TEDDM1Q5T9Z0 273 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 PTRHD1Q6GMV3 140 aaKnown RBP12.67□□□□□ -0.38
SMPD1-202ENST00000526280 IFT20Q8IY31 132 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 LILRA3Q8N6C8 439 aaPredicted RBP12.67□□□□□ -0.38
SMPD1-202ENST00000526280 C2CD4AQ8NCU7 369 aaPredicted RBP12.67□□□□□ -0.38
SMPD1-202ENST00000526280 MAPK15Q8TD08 544 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 SLC37A2Q8TED4 501 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 TSSK1BQ9BXA7 367 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 PARD6BQ9BYG5 372 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 TSPYL1Q9H0U9 437 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 COG4Q9H9E3 785 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 PPANQ9NQ55 473 aaKnown RBP12.67□□□□□ -0.38
SMPD1-202ENST00000526280 FBXO6Q9NRD1 293 aaPredicted RBP12.67□□□□□ -0.38
SMPD1-202ENST00000526280 OGFRQ9NZT2 677 aa12.67□□□□□ -0.38
SMPD1-202ENST00000526280 ZNF624Q9P2J8 865 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms