RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 TEFMQ96QE5 360 aaKnown RBP18.18■□□□□ 0.5
CAPN1-203ENST00000525013 FBXO8Q9NRD0 319 aa18.18■□□□□ 0.5
CAPN1-203ENST00000525013 IMP3Q9NV31 184 aaKnown RBP18.18■□□□□ 0.5
CAPN1-203ENST00000525013 PIH1D1Q9NWS0 290 aaKnown RBP18.18■□□□□ 0.5
CAPN1-203ENST00000525013 CFAP20Q9Y6A4 193 aaKnown RBP18.18■□□□□ 0.5
CAPN1-203ENST00000525013 GCN1Q92616 2671 aaKnown RBP18.17■□□□□ 0.5
CAPN1-203ENST00000525013 CFAP99D6REC4 459 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 ARHGAP6O43182 974 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 AP2A1O95782 977 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 C9P02748 559 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 POLBP06746 335 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 MC4RP32245 332 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 CAPZBP47756 277 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 LEPRP48357 1165 aaKnown RBP18.17■□□□□ 0.5
CAPN1-203ENST00000525013 SEPHS1P49903 392 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 FOXM1Q08050 763 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 LY6DQ14210 128 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 PLCL1Q15111 1095 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 RPS6KA1Q15418 735 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 ZRANB3Q5FWF4 1079 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 TAS2R42Q7RTR8 314 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 CACNA2D3Q8IZS8 1091 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 GPR150Q8NGU9 434 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 OR2L2Q8NH16 312 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 RTP4Q96DX8 246 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 ZDHHC12Q96GR4 267 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 COPS8Q99627 209 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 WWP1Q9H0M0 922 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 APMAPQ9HDC9 416 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 ACSL5Q9ULC5 683 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 ZNF148Q9UQR1 794 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 PCDHGA4Q9Y5G9 962 aa18.17■□□□□ 0.5
CAPN1-203ENST00000525013 POLR1CO15160 346 aaPredicted RBP18.16■□□□□ 0.5
CAPN1-203ENST00000525013 RAD1O60671 282 aa18.16■□□□□ 0.5
CAPN1-203ENST00000525013 C1QL1O75973 258 aa18.16■□□□□ 0.5
CAPN1-203ENST00000525013 IFNB1P01574 187 aa18.16■□□□□ 0.5
CAPN1-203ENST00000525013 ANKRD34CP0C6C1 535 aa18.16■□□□□ 0.5
CAPN1-203ENST00000525013 SLC35G4P0C7Q5 338 aa18.16■□□□□ 0.5
CAPN1-203ENST00000525013 MTHFD1P11586 935 aaKnown RBP18.16■□□□□ 0.5
CAPN1-203ENST00000525013 STIP1P31948 543 aaKnown RBP18.16■□□□□ 0.5
CAPN1-203ENST00000525013 SNX1Q13596 522 aa18.16■□□□□ 0.5
CAPN1-203ENST00000525013 GPR33Q49SQ1 333 aa18.16■□□□□ 0.5
CAPN1-203ENST00000525013 BCL7AQ4VC05 210 aa18.16■□□□□ 0.5
CAPN1-203ENST00000525013 CACHD1Q5VU97 1274 aa18.16■□□□□ 0.5
CAPN1-203ENST00000525013 FAM92BQ6ZTR7 304 aa18.16■□□□□ 0.5
CAPN1-203ENST00000525013 SLC13A5Q86YT5 568 aaPredicted RBP18.16■□□□□ 0.5
CAPN1-203ENST00000525013 CFAP206Q8IYR0 622 aa18.16■□□□□ 0.5
CAPN1-203ENST00000525013 HEXDCQ8WVB3 486 aa18.16■□□□□ 0.5
CAPN1-203ENST00000525013 UBE2Q2Q8WVN8 375 aa18.16■□□□□ 0.5
CAPN1-203ENST00000525013 C1orf54Q8WWF1 131 aa18.16■□□□□ 0.5
CAPN1-203ENST00000525013 C12orf66Q96MD2 445 aa18.16■□□□□ 0.5
CAPN1-203ENST00000525013 C19orf43Q9BQ61 176 aa18.16■□□□□ 0.5
CAPN1-203ENST00000525013 ZPBPQ9BS86 351 aa18.16■□□□□ 0.5
CAPN1-203ENST00000525013 CCDC78A2IDD5 438 aa18.15■□□□□ 0.5
CAPN1-203ENST00000525013 KLHL33A6NCF5 533 aa18.15■□□□□ 0.5
CAPN1-203ENST00000525013 AGAP14A8MT82 685 aa18.15■□□□□ 0.5
CAPN1-203ENST00000525013 LIASO43766 372 aa18.15■□□□□ 0.5
CAPN1-203ENST00000525013 KIF1CO43896 1103 aaKnown RBP18.15■□□□□ 0.5
CAPN1-203ENST00000525013 ATP1B2P14415 290 aaPredicted RBP18.15■□□□□ 0.5
CAPN1-203ENST00000525013 WT1P19544 449 aaPredicted RBP18.15■□□□□ 0.5
CAPN1-203ENST00000525013 LMAN1P49257 510 aa18.15■□□□□ 0.5
CAPN1-203ENST00000525013 CDKN1CP49918 316 aaPredicted RBP18.15■□□□□ 0.5
CAPN1-203ENST00000525013 GSE1Q14687 1217 aa18.15■□□□□ 0.5
CAPN1-203ENST00000525013 KLHL35Q6PF15 583 aa18.15■□□□□ 0.5
CAPN1-203ENST00000525013 MICALCLQ6ZW33 695 aa18.15■□□□□ 0.5
CAPN1-203ENST00000525013 LINC00523Q86TU6 105 aa18.15■□□□□ 0.5
CAPN1-203ENST00000525013 INSM2Q96T92 566 aaPredicted RBP18.15■□□□□ 0.5
CAPN1-203ENST00000525013 FRMD8P1Q9BZ68 369 aaPredicted RBP18.15■□□□□ 0.5
CAPN1-203ENST00000525013 LZTFL1Q9NQ48 299 aa18.15■□□□□ 0.5
CAPN1-203ENST00000525013 NLE1Q9NVX2 485 aaPredicted RBP18.15■□□□□ 0.5
CAPN1-203ENST00000525013 ZDHHC3Q9NYG2 299 aa18.15■□□□□ 0.5
CAPN1-203ENST00000525013 ZNF462Q96JM2 2506 aa18.15■□□□□ 0.5
CAPN1-203ENST00000525013 HELZ2Q9BYK8 2649 aaKnown RBP18.15■□□□□ 0.5
CAPN1-203ENST00000525013 E7EVH7 732 aa18.14■□□□□ 0.49
CAPN1-203ENST00000525013 TOX3O15405 576 aaPredicted RBP18.14■□□□□ 0.49
CAPN1-203ENST00000525013 SGTAO43765 313 aa18.14■□□□□ 0.49
CAPN1-203ENST00000525013 GAS8O95995 478 aa18.14■□□□□ 0.49
CAPN1-203ENST00000525013 CCDC175P0C221 793 aa18.14■□□□□ 0.49
CAPN1-203ENST00000525013 CYP4F2P78329 520 aa18.14■□□□□ 0.49
CAPN1-203ENST00000525013 KRT33BQ14525 404 aa18.14■□□□□ 0.49
CAPN1-203ENST00000525013 OASLQ15646 514 aaKnown RBP18.14■□□□□ 0.49
CAPN1-203ENST00000525013 MEI1Q5TIA1 1274 aa18.14■□□□□ 0.49
CAPN1-203ENST00000525013 DUS1LQ6P1R4 473 aaKnown RBP18.14■□□□□ 0.49
CAPN1-203ENST00000525013 SERPINA9Q86WD7 417 aa18.14■□□□□ 0.49
CAPN1-203ENST00000525013 ZNF843Q8N446 348 aa18.14■□□□□ 0.49
CAPN1-203ENST00000525013 DNAAF3Q8N9W5 541 aa18.14■□□□□ 0.49
CAPN1-203ENST00000525013 SPDYE1Q8NFV5 336 aaPredicted RBP18.14■□□□□ 0.49
CAPN1-203ENST00000525013 OR52K1Q8NGK4 314 aa18.14■□□□□ 0.49
CAPN1-203ENST00000525013 HM13Q8TCT9 377 aa18.14■□□□□ 0.49
CAPN1-203ENST00000525013 STYXQ8WUJ0 223 aa18.14■□□□□ 0.49
CAPN1-203ENST00000525013 CDKN2AIPNLQ96HQ2 116 aa18.14■□□□□ 0.49
CAPN1-203ENST00000525013 LINC00615Q96LM1 132 aaPredicted RBP18.14■□□□□ 0.49
CAPN1-203ENST00000525013 ZNF768Q9H5H4 540 aaKnown RBP18.14■□□□□ 0.49
CAPN1-203ENST00000525013 ETNK1Q9HBU6 452 aa18.14■□□□□ 0.49
CAPN1-203ENST00000525013 SIDT1Q9NXL6 827 aaKnown RBP18.14■□□□□ 0.49
CAPN1-203ENST00000525013 EPHA6Q9UF33 1036 aa18.14■□□□□ 0.49
CAPN1-203ENST00000525013 PILRAQ9UKJ1 303 aa18.14■□□□□ 0.49
CAPN1-203ENST00000525013 SPTA1P02549 2419 aa18.14■□□□□ 0.49
CAPN1-203ENST00000525013 ERI2A8K979 691 aaKnown RBP18.13■□□□□ 0.49
CAPN1-203ENST00000525013 STK17BO94768 372 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms