RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 PEX11BO96011 259 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 SBK3P0C264 359 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 ELFN1P0C7U0 828 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 MTPNP58546 118 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 NFATC2Q13469 925 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 AFMIDQ63HM1 303 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 TLDC1Q6P9B6 456 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 SLC39A11Q8N1S5 342 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 RHEBL1Q8TAI7 183 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 SORCS1Q8WY21 1168 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 ASB9Q96DX5 294 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 HHIPL1Q96JK4 782 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 ALG2Q9H553 416 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 RMND5AQ9H871 391 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 BRD9Q9H8M2 597 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 MGAT4DA6NG13 374 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 ZNF195O14628 629 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 PCDH8O95206 1070 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 NTRK1P04629 796 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 HMGA1P17096 107 aaKnown RBP10.01□□□□□ -0.81
MCF2-209ENST00000520602 PTPN2P17706 415 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 HMGCLP35914 325 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 ZNF140P52738 457 aaPredicted RBP10.01□□□□□ -0.81
MCF2-209ENST00000520602 CAP1Q01518 475 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 FAM98BQ52LJ0 330 aaKnown RBP10.01□□□□□ -0.81
MCF2-209ENST00000520602 XKR6Q5GH73 641 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 LY6G5CQ5SRR4 150 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 DPY19L3Q6ZPD9 716 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 ANKRD46Q86W74 232 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 SYT12Q8IV01 421 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 SCAMP4Q969E2 229 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 LRRC58Q96CX6 371 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 TTLL2Q9BWV7 592 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 LRTM1Q9HBL6 345 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 HCFC1R1Q9NWW0 138 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 FAF1Q9UNN5 650 aaPredicted RBP10.01□□□□□ -0.81
MCF2-209ENST00000520602 DHRS7Q9Y394 339 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 EFCAB14O75071 495 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 BCAS2O75934 225 aaPredicted RBP10.01□□□□□ -0.81
MCF2-209ENST00000520602 CATP04040 527 aaKnown RBP10.01□□□□□ -0.81
MCF2-209ENST00000520602 ERVK-8P63133 956 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 ACSM2AQ08AH3 577 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 CARD16Q5EG05 197 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 ARSIQ5FYB1 569 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 ACSM2BQ68CK6 577 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 GLYATQ6IB77 296 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 SERPINA13PQ6UXR4 307 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 MBOAT1Q6ZNC8 495 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 KBTBD2Q8IY47 623 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 VPS37AQ8NEZ2 397 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 GPR156Q8NFN8 814 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 ROPN1LQ96C74 230 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 BDH2Q9BUT1 245 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 MAGEE1Q9HCI5 957 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 IL17CQ9P0M4 197 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 SNX6Q9UNH7 406 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 LZTS1Q9Y250 596 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 BRCA1P38398 1863 aaKnown RBP10.01□□□□□ -0.81
MCF2-209ENST00000520602 TRBC1P01850 177 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 FCGR1AP12314 374 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 TYRP14679 529 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 NEK2P51955 445 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 NAA20P61599 178 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 BNIP2Q12982 314 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 FAM174BQ3ZCQ3 159 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 KLHDC10Q6PID8 442 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 SLC2A7Q6PXP3 512 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 GOLGA7Q7Z5G4 137 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 TMEM25Q86YD3 366 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 CBR4Q8N4T8 237 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 TOP1MTQ969P6 601 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 RMND5BQ96G75 393 aaPredicted RBP10.01□□□□□ -0.81
MCF2-209ENST00000520602 SH3GL1Q99961 368 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 OSGEPL1Q9H4B0 414 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 POPDC3Q9HBV1 291 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 PCDH12Q9NPG4 1184 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 TDP1Q9NUW8 608 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 KIF17Q9P2E2 1029 aa10.01□□□□□ -0.81
MCF2-209ENST00000520602 TDRKHQ9Y2W6 561 aaKnown RBP10.01□□□□□ -0.81
MCF2-209ENST00000520602 SLC28A1O00337 649 aa10□□□□□ -0.81
MCF2-209ENST00000520602 DEAF1O75398 565 aaPredicted RBP10□□□□□ -0.81
MCF2-209ENST00000520602 G6PDP11413 515 aa10□□□□□ -0.81
MCF2-209ENST00000520602 EFNA1P20827 205 aaPredicted RBP10□□□□□ -0.81
MCF2-209ENST00000520602 MAPK1P28482 360 aa10□□□□□ -0.81
MCF2-209ENST00000520602 CTSOP43234 321 aaPredicted RBP10□□□□□ -0.81
MCF2-209ENST00000520602 TCEA2Q15560 299 aa10□□□□□ -0.81
MCF2-209ENST00000520602 ZNF423Q2M1K9 1284 aa10□□□□□ -0.81
MCF2-209ENST00000520602 RAET1GQ6H3X3 334 aa10□□□□□ -0.81
MCF2-209ENST00000520602 C22orf39Q6P5X5 142 aa10□□□□□ -0.81
MCF2-209ENST00000520602 TMC5Q6UXY8 1006 aa10□□□□□ -0.81
MCF2-209ENST00000520602 ATG14Q6ZNE5 492 aa10□□□□□ -0.81
MCF2-209ENST00000520602 SLC30A3Q99726 388 aa10□□□□□ -0.81
MCF2-209ENST00000520602 HEPHQ9BQS7 1158 aa10□□□□□ -0.81
MCF2-209ENST00000520602 NUSAP1Q9BXS6 441 aaKnown RBP10□□□□□ -0.81
MCF2-209ENST00000520602 B4GALT6Q9UBX8 382 aa10□□□□□ -0.81
MCF2-209ENST00000520602 PRORSD1PA6NEY8 169 aa10□□□□□ -0.81
MCF2-209ENST00000520602 LOC730098B7Z3J9 87 aa10□□□□□ -0.81
MCF2-209ENST00000520602 PDLIM1O00151 329 aa10□□□□□ -0.81
MCF2-209ENST00000520602 UBFD1O14562 309 aaKnown RBP10□□□□□ -0.81
MCF2-209ENST00000520602 SLC9A3R1O14745 358 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms