RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 H3BM21 787 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 ATP8B1O43520 1251 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 VPS26AO75436 327 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 GPC4O75487 556 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 POP7O75817 140 aaKnown RBP11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 SLCO2B1O94956 709 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 SYPP08247 313 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 CBSLP0DN79 551 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 VCLP18206 1134 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 CRABP2P29373 138 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 CBSP35520 551 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 CDKN2DP55273 166 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 TAS2R39P59534 338 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 HNRNPKP61978 463 aaKnown RBP eCLIP11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 KIF19Q2TAC6 998 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 TNFAIP8L3Q5GJ75 292 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 METRNLQ641Q3 311 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 KCTD16Q68DU8 428 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 XKR5Q6UX68 686 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 WASH2PQ6VEQ5 465 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 NEK10Q6ZWH5 1172 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 DET1Q7L5Y6 550 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 FSTL5Q8N475 847 aaPredicted RBP11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 DCLK2Q8N568 766 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 OR2W6PQ8NHA6 318 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 EPS8L3Q8TE67 593 aaKnown RBP11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 ASZ1Q8WWH4 475 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 INPP5DQ92835 1189 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 TSACCQ96A04 125 aaPredicted RBP11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 PGM2Q96G03 612 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 PDLIM5Q96HC4 596 aaKnown RBP11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 ELF4Q99607 663 aaPredicted RBP11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 OLFM1Q99784 485 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 SLC13A1Q9BZW2 595 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 DPEP2Q9H4A9 486 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 CARS2Q9HA77 564 aaKnown RBP11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 MRPL40Q9NQ50 206 aaKnown RBP11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 WASH6PQ9NQA3 447 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 ZNHIT2Q9UHR6 403 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 KLF15Q9UIH9 416 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 PCOLCE2Q9UKZ9 415 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 SNX11Q9Y5W9 270 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 CSNK1G3Q9Y6M4 447 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 CEP250Q9BV73 2442 aa11.77□□□□□ -0.53
PDLIM5-220ENST00000514830 GPR179Q6PRD1 2367 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 A0A1B0GTQ1 180 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 CCDC189A1A4V9 331 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 E5RI56 91 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 ARHGAP33O14559 1287 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 FOXD2O60548 495 aaPredicted RBP11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 NIPSNAP2O75323 286 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 ALDOAP04075 364 aaKnown RBP11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 F7P08709 466 aaPredicted RBP11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 ZNF806P0C7X5 589 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 ZNF883P0CG24 379 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 ENO3P13929 434 aaPredicted RBP11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 STMN1P16949 149 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 JUNDP17535 347 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 CHRM3P20309 590 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 CCR7P32248 378 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 GNPDA1P46926 289 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 ARRB1P49407 418 aaPredicted RBP11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 SERPINB8P50452 374 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 RAB10P61026 200 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 GRIK2Q13002 908 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 USP10Q14694 798 aaKnown RBP11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 TMED2Q15363 201 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 TTLL9Q3SXZ7 439 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 TRIM61Q5EBN2 209 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 MROH9Q5TGP6 573 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 AGAP9Q5VTM2 703 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 LRRC8EQ6NSJ5 796 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 LVRNQ6Q4G3 990 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 CRTC3Q6UUV7 619 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 LAYNQ6UX15 382 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 OTOAQ7RTW8 1153 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 LCA5Q86VQ0 697 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 HID1Q8IV36 788 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 ZBTB2Q8N680 514 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 GPATCH11Q8N954 259 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 ACVR1CQ8NER5 493 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 LKAAEAR1Q8TD35 194 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 CD200R1Q8TD46 325 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 ACMSDQ8TDX5 336 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 GLMNQ92990 594 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 ELMO2Q96JJ3 720 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 CABS1Q96KC9 395 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 UBXN10Q96LJ8 280 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 NDNQ99608 321 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 GPR21Q99679 349 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 ARRDC1-AS1Q9H2J1 176 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 SPASTQ9UBP0 616 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 SLC23A2Q9UGH3 650 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 APOBEC3BQ9UH17 382 aaKnown RBP11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 ACSL5Q9ULC5 683 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 CDYLQ9Y232 598 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 LAMA1P25391 3075 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 CABIN1Q9Y6J0 2220 aa11.76□□□□□ -0.53
PDLIM5-220ENST00000514830 TRIM49D1C9J1S8 452 aa11.75□□□□□ -0.53
PDLIM5-220ENST00000514830 KHNYNO15037 678 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms