RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 MTHFD1P11586 935 aaKnown RBP4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 ODC1P11926 461 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 CD247P20963 164 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 CES1P23141 567 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 AKAP5P24588 427 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 NFKBIAP25963 317 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 CD40LGP29965 261 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 AKT1P31749 480 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 HPCAL1P37235 193 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 ETFBP38117 255 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 OPRL1P41146 370 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 CASP2P42575 452 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 MAP2K3P46734 347 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 ST13P50502 369 aaKnown RBP4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 CRYBB1P53674 252 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 CDKN2DP55273 166 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 CDH13P55290 713 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 ECT2LQ008S8 904 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 GNA12Q03113 381 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 ITKQ08881 620 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 GRB7Q14451 532 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 BCL2A1Q16548 175 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 PCSK7Q16549 785 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 RBBP7Q16576 425 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF181Q2M3W8 571 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF792Q3KQV3 632 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 FUT11Q495W5 492 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 DUSP28Q4G0W2 176 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 RABL3Q5HYI8 236 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 MARCH8Q5T0T0 291 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 C1QTNF12Q5T7M4 302 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF772Q68DY9 489 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 XAF1Q6GPH4 301 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 UGT3A1Q6NUS8 523 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 TAPT1Q6NXT6 567 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 AFTPHQ6ULP2 937 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 LYPD4Q6UWN0 246 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 LRRC8DQ7L1W4 858 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 NECAB2Q7Z6G3 386 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 PLD3Q8IV08 490 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 FAM126BQ8IXS8 530 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 THEM5Q8N1Q8 247 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 RYBPQ8N488 228 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 ATP6V0D2Q8N8Y2 350 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 FNDC5Q8NAU1 212 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 CHDHQ8NE62 594 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 OR2T12Q8NG77 320 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 OR6J1Q8NGC5 347 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 OR13J1Q8NGT2 312 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 BRSK1Q8TDC3 778 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 ANKRD49Q8WVL7 239 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 IPCEF1Q8WWN9 437 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 STARD8Q92502 1023 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 EDEM1Q92611 657 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 FCGR1BQ92637 280 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 TANKQ92844 425 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 EXT2Q93063 718 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 PTERQ96BW5 349 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 FBXL8Q96CD0 374 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 SLC47A1Q96FL8 570 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 PCED1BQ96HM7 432 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 FCRL2Q96LA5 508 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 PPP3R2Q96LZ3 170 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 C3orf30Q96M34 536 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 CEP295NLQ96MC4 621 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 DACH2Q96NX9 599 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 ATOH8Q96SQ7 321 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF382Q96SR6 550 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 APOL4Q9BPW4 351 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 ACBD6Q9BR61 282 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 CORO1BQ9BR76 489 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 C17orf80Q9BSJ5 609 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 AARSD1Q9BTE6 412 aaKnown RBP4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 HGH1Q9BTY7 390 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 ASPSCR1Q9BZE9 553 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 CEP44Q9C0F1 390 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 NAA50Q9GZZ1 169 aaKnown RBP4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 SIK2Q9H0K1 926 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 FAM49AQ9H0Q0 323 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 TRIT1Q9H3H1 467 aaKnown RBP4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 TOR3AQ9H497 397 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 EHD1Q9H4M9 534 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 RETREG1Q9H6L5 497 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 PARVBQ9HBI1 364 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 TNFRSF12AQ9NP84 129 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 AKIP1Q9NQ31 210 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 SLC52A3Q9NQ40 469 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 INIPQ9NRY2 104 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 PAK1IP1Q9NWT1 392 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 SMPD4Q9NXE4 827 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZDHHC3Q9NYG2 299 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 ANKMY1Q9P2S6 941 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 RBPJLQ9UBG7 517 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 ATXN7L1Q9ULK2 861 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 KCNH4Q9UQ05 1017 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 GINS2Q9Y248 185 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 EIF3LQ9Y262 564 aaKnown RBP4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 UGT2A1Q9Y4X1 527 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 IPPQ9Y573 584 aa4.9□□□□□ -1.63
HMGB3P16-201ENST00000508037 A3GALT2U3KPV4 340 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms