RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 RELL2Q8NC24 303 aaPredicted RBP3.22□□□□□ -1.89
TCOF1-208ENST00000506063 ANKRD20A12PQ8NF67 263 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 GPR150Q8NGU9 434 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 TMEM174Q8WUU8 243 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 SPOCK2Q92563 424 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 PIGTQ969N2 578 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 SCMH1Q96GD3 660 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 EXOC2Q96KP1 924 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 AK8Q96MA6 479 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 SIGLEC12Q96PQ1 595 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 SLC2A13Q96QE2 648 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 CD180Q99467 661 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 AGAP2Q99490 1192 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 SIK2Q9H0K1 926 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.22□□□□□ -1.89
TCOF1-208ENST00000506063 ESRP2Q9H6T0 727 aaKnown RBP3.22□□□□□ -1.89
TCOF1-208ENST00000506063 TMEM8AQ9HCN3 771 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 PLSCR2Q9NRY7 297 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 PIGVQ9NUD9 493 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 POT1Q9NUX5 634 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 PANK4Q9NVE7 773 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 DDIT4Q9NX09 232 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 HESX1Q9UBX0 185 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 B4GALT6Q9UBX8 382 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 Q9UFV3 132 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 SLC23A2Q9UGH3 650 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 NOL7Q9UMY1 257 aaKnown RBP3.22□□□□□ -1.89
TCOF1-208ENST00000506063 MTMR6Q9Y217 621 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 SIK3Q9Y2K2 1263 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 FAM215AQ9Y5M1 114 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 EPN1Q9Y6I3 576 aaPredicted RBP3.22□□□□□ -1.89
TCOF1-208ENST00000506063 DYNC2H1Q8NCM8 4307 aaKnown RBP3.22□□□□□ -1.89
TCOF1-208ENST00000506063 NCKAP5O14513 1909 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 SYNJ2BP-COX16A0A087WUM0 186 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 A0A1B0GTH9 108 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 OR52A4PA6NMU1 304 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 GOLGA8SH3BPF8 625 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 RNF225M0QZC1 329 aaPredicted RBP3.21□□□□□ -1.9
TCOF1-208ENST00000506063 CLSTN1O94985 981 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 HEXIM1O94992 359 aaKnown RBP3.21□□□□□ -1.9
TCOF1-208ENST00000506063 GOSR1O95249 250 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 IGSF6O95976 241 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 HPP00738 406 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 VIPP01282 170 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 CYP1A1P04798 512 aaPredicted RBP3.21□□□□□ -1.9
TCOF1-208ENST00000506063 ATP1A1P05023 1023 aaKnown RBP3.21□□□□□ -1.9
TCOF1-208ENST00000506063 GLI4P10075 376 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 VDRP11473 427 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 COX6A1P12074 109 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 SLC2A4P14672 509 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 AGXTP21549 392 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 XPAP23025 273 aaPredicted RBP3.21□□□□□ -1.9
TCOF1-208ENST00000506063 PTGS2P35354 604 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 GPD2P43304 727 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 ZFP36L2P47974 494 aaKnown RBP3.21□□□□□ -1.9
TCOF1-208ENST00000506063 NEK4P51957 841 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 MCCD1P59942 119 aaPredicted RBP3.21□□□□□ -1.9
TCOF1-208ENST00000506063 SNRPFP62306 86 aaKnown RBP3.21□□□□□ -1.9
TCOF1-208ENST00000506063 YWHAZP63104 245 aaKnown RBP3.21□□□□□ -1.9
TCOF1-208ENST00000506063 ACOX1Q15067 660 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 CYTH1Q15438 398 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 SLC25A35Q3KQZ1 300 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 C8orf34Q49A92 452 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 NKAIN1Q4KMZ8 207 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 FILIP1LQ4L180 1135 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 DNTTIP2Q5QJE6 756 aaKnown RBP3.21□□□□□ -1.9
TCOF1-208ENST00000506063 MANEALQ5VSG8 457 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 C1orf189Q5VU69 101 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 IRAK1BP1Q5VVH5 260 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 RAET1GQ6H3X3 334 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 KIAA0930Q6ICG6 404 aaPredicted RBP3.21□□□□□ -1.9
TCOF1-208ENST00000506063 POMZP3Q6PJE2 187 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 ABRAXAS1Q6UWZ7 409 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 DNM1P46Q6ZS02 220 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 Q6ZVL8 140 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 STRADAQ7RTN6 431 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.21□□□□□ -1.9
TCOF1-208ENST00000506063 DRC7Q8IY82 874 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 DEFB106AQ8N104 65 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 LIX1Q8N485 282 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 ARIH2OSQ8N7S6 290 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 SLCO2A1Q92959 643 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 FAXDC2Q96IV6 333 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 EPSTI1Q96J88 318 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 C8orf76Q96K31 380 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 C1orf74Q96LT6 269 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 ZNF641Q96N77 438 aaPredicted RBP3.21□□□□□ -1.9
TCOF1-208ENST00000506063 WDR24Q96S15 920 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 TTYH2Q9BSA4 534 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 REG4Q9BYZ8 158 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 TNMDQ9H2S6 317 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 TP63Q9H3D4 680 aaPredicted RBP3.21□□□□□ -1.9
TCOF1-208ENST00000506063 RETREG1Q9H6L5 497 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 RMI1Q9H9A7 625 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 ZFYVE1Q9HBF4 777 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 POPDC2Q9HBU9 364 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 ZNF160Q9HCG1 818 aa3.21□□□□□ -1.9
TCOF1-208ENST00000506063 SAMSN1Q9NSI8 373 aaKnown RBP3.21□□□□□ -1.9
TCOF1-208ENST00000506063 ZNF701Q9NV72 531 aaPredicted RBP3.21□□□□□ -1.9
TCOF1-208ENST00000506063 SEPT11Q9NVA2 429 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms