RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, human

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF2-208	ENST00000496852	TPP1	O14773	563 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	RFPL1	O75677	317 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	STMN1	P16949	149 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	AOAH	P28039	575 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	OAS2	P29728	719 aa	Known RBP	13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	HPD	P32754	393 aa	Predicted RBP	13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CTSK	P43235	329 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SERPINB8	P50452	374 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	RAB10	P61026	200 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	ZNF460	Q14592	562 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PLA2G4E	Q3MJ16	856 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TNFAIP8L3	Q5GJ75	292 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	UGT3A1	Q6NUS8	523 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CHST15	Q7LFX5	561 aa	Predicted RBP	13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	RD3	Q7Z3Z2	195 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PIM3	Q86V86	326 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	HID1	Q8IV36	788 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SPNS2	Q8IVW8	549 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PHACTR4	Q8IZ21	702 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SIDT2	Q8NBJ9	832 aa	Known RBP	13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SUMF1	Q8NBK3	374 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	OR2L2	Q8NH16	312 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CEP76	Q8TAP6	659 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TSPAN17	Q96FV3	270 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TIMM29	Q9BSF4	260 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TCEAL2	Q9H3H9	227 aa	Predicted RBP	13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CAAP1	Q9H8G2	361 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CAPN10	Q9HC96	672 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SNX15	Q9NRS6	342 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	RAB23	Q9ULC3	237 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SMG5	Q9UPR3	1016 aa	Known RBP	13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PCDHGA5	Q9Y5G8	931 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852		A0A1W2PPM1	405 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	KLHL33	A6NCF5	533 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	MGAT4D	A6NG13	374 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PRR19	A6NJB7	356 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	GOLGA8R	I6L899	631 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SCAMP1	O15126	338 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PHGDH	O43175	533 aa	Known RBP	13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TNF	P01375	233 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CSF2	P04141	144 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	NME1	P15531	152 aa	Known RBP	13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PBLD	P30039	288 aa	Predicted RBP	13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SKIV2L2	P42285	1042 aa	Known RBP	13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SLC12A2	P55011	1212 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	ARHGAP8	P85298	464 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	DMPK	Q09013	629 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	INSC	Q1MX18	579 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	KIF19	Q2TAC6	998 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	ZNF542P	Q5EBM4	170 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	LAIR1	Q6GTX8	287 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SLC23A3	Q6PIS1	610 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TMEM207	Q6UWW9	146 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	OTOA	Q7RTW8	1153 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	AMZ2	Q86W34	360 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	C4orf33	Q8N1A6	199 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	HM13	Q8TCT9	377 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	ELMO1	Q92556	727 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SELENOS	Q9BQE4	189 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	KCNH6	Q9H252	994 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	ERVMER34-1	Q9H9K5	563 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SARS2	Q9NP81	518 aa	Known RBP	13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	KCNK9	Q9NPC2	374 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	KLHL42	Q9P2K6	505 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TRMT6	Q9UJA5	497 aa	Known RBP	13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PLEKHM1	Q9Y4G2	1056 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	GPSM3	Q9Y4H4	160 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SNX11	Q9Y5W9	270 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	ST14	Q9Y5Y6	855 aa		13.71	□□□□□ -0.21
ATPAF2-208	ENST00000496852	ARID1B	Q8NFD5	2236 aa	Predicted RBP	13.71	□□□□□ -0.22
ATPAF2-208	ENST00000496852	SLC5A10	A0PJK1	596 aa		13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	PATE3	B3GLJ2	98 aa		13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	KPNA5	O15131	536 aa		13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	KCNJ13	O60928	360 aa		13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	GPC4	O75487	556 aa		13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	SLC35E2B	P0CK96	405 aa		13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	ACP5	P13686	325 aa		13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	ZNF37A	P17032	561 aa	Predicted RBP	13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	TYK2	P29597	1187 aa		13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	MPL	P40238	635 aa		13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	BLK	P51451	505 aa		13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	PDAP1	Q13442	181 aa	Known RBP	13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	LRP8	Q14114	963 aa		13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	GBX1	Q14549	363 aa		13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	PAQR3	Q6TCH7	311 aa		13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	NAPRT	Q6XQN6	538 aa		13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	MTERF4	Q7Z6M4	381 aa	Known RBP	13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	TRABD2A	Q86V40	505 aa		13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	ZBTB2	Q8N680	514 aa		13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	LILRA3	Q8N6C8	439 aa	Predicted RBP	13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	INPP5D	Q92835	1189 aa		13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	SMC6	Q96SB8	1091 aa		13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	TMEM168	Q9H0V1	697 aa		13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	IRF2BPL	Q9H1B7	796 aa		13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	ARRDC1-AS1	Q9H2J1	176 aa		13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	COG4	Q9H9E3	785 aa		13.7	□□□□□ -0.22
ATPAF2-208	ENST00000496852	GPAM	Q9HCL2	828 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms