RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 DSCR3O14972 297 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 NCAM2O15394 837 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 HOXD8P13378 290 aaPredicted RBP11.55□□□□□ -0.56
HDAC4-210ENST00000493582 S100A5P33763 92 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 GBX1Q14549 363 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 SMYD5Q6GMV2 418 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 TUBA3EQ6PEY2 450 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 DLEU7Q6UYE1 221 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 BNIPLQ7Z465 357 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 ZNF438Q7Z4V0 828 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 NRARPQ7Z6K4 114 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 SIMC1Q8NDZ2 872 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 PROKR1Q8TCW9 393 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 SLC47A1Q96FL8 570 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 NPY6RQ99463 290 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 CDADC1Q9BWV3 514 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 UGT2B28Q9BY64 529 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 RIBC2Q9H4K1 309 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 TREX1Q9NSU2 369 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 AIG1Q9NVV5 245 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 ERVK13-1Q9NX77 482 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 SMPD4Q9NXE4 827 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 SCN3BQ9NY72 215 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 ZNF214Q9UL59 606 aaPredicted RBP11.55□□□□□ -0.56
HDAC4-210ENST00000493582 TYW5A2RUC4 315 aaKnown RBP11.55□□□□□ -0.56
HDAC4-210ENST00000493582 MTSS1O43312 755 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 PEX10O60683 326 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 MYCLP1P12525 358 aaPredicted RBP11.55□□□□□ -0.56
HDAC4-210ENST00000493582 GGT1P19440 569 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 DGKQP52824 942 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 TMEM132BQ14DG7 1078 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 TBRG1Q3YBR2 411 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 PRSS36Q5K4E3 855 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 FAM160B1Q5W0V3 765 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 EFCAB12Q6NXP0 572 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 DCBLD1Q8N8Z6 715 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 BARD1Q99728 777 aaKnown RBP11.55□□□□□ -0.56
HDAC4-210ENST00000493582 TBCDQ9BTW9 1192 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 BEX2Q9BXY8 128 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 USE1Q9NZ43 259 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 SATB2Q9UPW6 733 aa11.55□□□□□ -0.56
HDAC4-210ENST00000493582 LOC100506127A0A0U1RQW1 187 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 LINC00854A0A1B0GVQ3 168 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 KRT87PA6NCN2 255 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 GSTA4O15217 222 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 SLC16A6O15403 523 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 RGS10O43665 173 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 PAMP19021 973 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 DEFA1P59665 94 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 DEFA3P59666 94 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 ZNF45Q02386 682 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 PCSK7Q16549 785 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 LY6KQ17RY6 165 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 RAP1GAP2Q684P5 730 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 CYP20A1Q6UW02 462 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 AHSA2Q719I0 299 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 DET1Q7L5Y6 550 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 NECAB2Q7Z6G3 386 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 CYP4Z1Q86W10 505 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 EID3Q8N140 333 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 ZNF566Q969W8 418 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 MAP6Q96JE9 813 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 ZNF583Q96ND8 569 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 MYOCQ99972 504 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 WDR6Q9NNW5 1121 aaKnown RBP11.54□□□□□ -0.56
HDAC4-210ENST00000493582 ENTPD7Q9NQZ7 604 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 TOR4AQ9NXH8 423 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 COL11A2P13942 1736 aaPredicted RBP11.54□□□□□ -0.56
HDAC4-210ENST00000493582 A0A0G2JMP0 313 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 A0A0X1KG70 313 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 DFFAO00273 331 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 BEST1O76090 585 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 GADD45AP24522 165 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 EPHA2P29317 976 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 HTR2BP41595 481 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 OR4D1Q15615 310 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 TRAF7Q6Q0C0 670 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 CTU1Q7Z7A3 348 aaKnown RBP11.54□□□□□ -0.56
HDAC4-210ENST00000493582 SVOPLQ8N434 492 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 OR10A6Q8NH74 314 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 TSPEARQ8WU66 669 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 BHMTQ93088 406 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 WNT8BQ93098 351 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 C18orf25Q96B23 403 aaPredicted RBP11.54□□□□□ -0.56
HDAC4-210ENST00000493582 FYTTD1Q96QD9 318 aaKnown RBP11.54□□□□□ -0.56
HDAC4-210ENST00000493582 VAT1Q99536 393 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 TAS2R9Q9NYW1 312 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 AAR2Q9Y312 384 aaKnown RBP11.54□□□□□ -0.56
HDAC4-210ENST00000493582 SPEF1Q9Y4P9 236 aa11.54□□□□□ -0.56
HDAC4-210ENST00000493582 A0A0U1RQS6 177 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 OR51F1A6NGY5 319 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 CLDN24A6NM45 220 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 CDK2AP1O14519 115 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 TFECO14948 347 aaPredicted RBP11.53□□□□□ -0.56
HDAC4-210ENST00000493582 FAM20BO75063 409 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 MTHFD2P13995 350 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 CXCR3P49682 368 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 YWHAHQ04917 246 aaPredicted RBP11.53□□□□□ -0.56
HDAC4-210ENST00000493582 LRRC26Q2I0M4 334 aa11.53□□□□□ -0.56
HDAC4-210ENST00000493582 ATP6AP1LQ52LC2 224 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms