RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 SGF29Q96ES7 293 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 ZNF514Q96K75 400 aaPredicted RBP11.4□□□□□ -0.58
CTSA-209ENST00000493522 BOCQ9BWV1 1114 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 KLC4Q9NSK0 619 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 GRHL1Q9NZI5 618 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 IL1RAPL1Q9NZN1 696 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 MARCH4Q9P2E8 410 aaPredicted RBP11.4□□□□□ -0.58
CTSA-209ENST00000493522 ST14Q9Y5Y6 855 aa11.4□□□□□ -0.58
CTSA-209ENST00000493522 COL27A1Q8IZC6 1860 aaPredicted RBP11.4□□□□□ -0.59
CTSA-209ENST00000493522 IGLV3-16A0A075B6K0 115 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 TP73O15350 636 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 ATP1B2P14415 290 aaPredicted RBP11.39□□□□□ -0.59
CTSA-209ENST00000493522 ARNTP27540 789 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 PPARGP37231 505 aaPredicted RBP11.39□□□□□ -0.59
CTSA-209ENST00000493522 ELK3P41970 407 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 NSG1P42857 185 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 RPIAP49247 311 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 TTPAP49638 278 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 PRLHRP49683 370 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 PLTPP55058 493 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 GUCY2DQ02846 1103 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 CAV1Q03135 178 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 TLE3Q04726 772 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 BIRC2Q13490 618 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 THOC5Q13769 683 aaKnown RBP11.39□□□□□ -0.59
CTSA-209ENST00000493522 NR0B2Q15466 257 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 SEPT7Q16181 437 aaKnown RBP11.39□□□□□ -0.59
CTSA-209ENST00000493522 BCL7AQ4VC05 210 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 SPANXN3Q5MJ09 141 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 MRNIPQ6NTE8 343 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 PACS1Q6VY07 963 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 CERS6Q6ZMG9 384 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 CENPUQ71F23 418 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 ZNF605Q86T29 641 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 TMEM135Q86UB9 458 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 ANKMY2Q8IV38 441 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 SFTPA2Q8IWL1 248 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 ARL10Q8N8L6 244 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.39□□□□□ -0.59
CTSA-209ENST00000493522 ZDHHC1Q8WTX9 485 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 EBNA1BP2Q99848 306 aaKnown RBP11.39□□□□□ -0.59
CTSA-209ENST00000493522 NAT9Q9BTE0 207 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 C20orf96Q9NUD7 363 aaPredicted RBP11.39□□□□□ -0.59
CTSA-209ENST00000493522 SPATS2LQ9NUQ6 558 aaKnown RBP11.39□□□□□ -0.59
CTSA-209ENST00000493522 NCKIPSDQ9NZQ3 722 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 SLC23A2Q9UGH3 650 aa11.39□□□□□ -0.59
CTSA-209ENST00000493522 ZC3H7BQ9UGR2 993 aaKnown RBP11.39□□□□□ -0.59
CTSA-209ENST00000493522 UNC13CQ8NB66 2214 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 LY6G6EA0A0G2JKS1 128 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 ZCWPW2A0A1B0GU75 182 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 UBA6A0AVT1 1052 aaPredicted RBP11.38□□□□□ -0.59
CTSA-209ENST00000493522 CPED1A4D0V7 1026 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 PDZK1P1A8MUH7 402 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 NOBOXO60393 691 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 NDUFS3O75489 264 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 POP7O75817 140 aaKnown RBP11.38□□□□□ -0.59
CTSA-209ENST00000493522 TTC4O95801 387 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 MT-CO3P00414 261 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 CKMT1AP12532 417 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 OGNP20774 298 aaKnown RBP11.38□□□□□ -0.59
CTSA-209ENST00000493522 DUSP3P51452 185 aaPredicted RBP11.38□□□□□ -0.59
CTSA-209ENST00000493522 MAZP56270 477 aaKnown RBP11.38□□□□□ -0.59
CTSA-209ENST00000493522 PCBP4P57723 403 aaKnown RBP11.38□□□□□ -0.59
CTSA-209ENST00000493522 CXADRP78310 365 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 FASTKD3Q14CZ7 662 aaKnown RBP11.38□□□□□ -0.59
CTSA-209ENST00000493522 TRADDQ15628 312 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 LONRF1Q17RB8 773 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 C14orf28Q4W4Y0 310 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 ZNF470Q6ECI4 717 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 GUSBP11Q6P575 273 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 EFL1Q7Z2Z2 1120 aaKnown RBP11.38□□□□□ -0.59
CTSA-209ENST00000493522 C11orf96Q7Z7L8 435 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 SDCCAG8Q86SQ7 713 aaPredicted RBP11.38□□□□□ -0.59
CTSA-209ENST00000493522 AMZ2Q86W34 360 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 KCNMB4Q86W47 210 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 CCDC25Q86WR0 208 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 IGDCC3Q8IVU1 814 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 SPACA3Q8IXA5 215 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 ZBED8Q8IZ13 594 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 CLDN19Q8N6F1 224 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 FAM181AQ8N9Y4 354 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 ZNF248Q8NDW4 579 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 FBXO36Q8NEA4 188 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 PATE1Q8WXA2 126 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 ART4Q93070 314 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 LRRC39Q96DD0 335 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 SGSM3Q96HU1 749 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 VPS37BQ9H9H4 285 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 SAYSD1Q9NPB0 183 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 TBC1D29Q9UFV1 150 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 U3KQA8 63 aa11.38□□□□□ -0.59
CTSA-209ENST00000493522 TENM4Q6N022 2769 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 E7ESA3 106 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 F8W8V4 182 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 ERVH48-1M5A8F1 160 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 QSOX1O00391 747 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 PFDN6O15212 129 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 SGTAO43765 313 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 OR1I1O60431 355 aa11.37□□□□□ -0.59
CTSA-209ENST00000493522 AP2A2O94973 939 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms