RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 G3BP2Q9UN86 482 aaKnown RBP13.83□□□□□ -0.2
PTPN7-216ENST00000492977 MUC22E2RYF6 1773 aaPredicted RBP13.82□□□□□ -0.2
PTPN7-216ENST00000492977 QSOX1O00391 747 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 CRCPO75575 148 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 UROSP10746 265 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 PSMC3P17980 439 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 VCLP18206 1134 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 AKT1P31749 480 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 CCR7P32248 378 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 GJA4P35212 333 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 OPRD1P41143 372 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 ATP4BP51164 291 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 SLC25A3Q00325 362 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 ELP6Q0PNE2 266 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 ADAM15Q13444 863 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 SQLEQ14534 574 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 GBX1Q14549 363 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 LDLRAP1Q5SW96 308 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 SULT1C3Q6IMI6 304 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 CES5AQ6NT32 575 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 CHCHD4Q8N4Q1 142 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 DDHD1Q8NEL9 900 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 PIP4K2CQ8TBX8 421 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 TWIST2Q8WVJ9 160 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 BTN2A2Q8WVV5 523 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 ELSPBP1Q96BH3 223 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 PPP1R16AQ96I34 528 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 VPS35Q96QK1 796 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 ZNF382Q96SR6 550 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 FAM129BQ96TA1 746 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 CCT7Q99832 543 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 THTPAQ9BU02 230 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 RIOK2Q9BVS4 552 aaKnown RBP13.82□□□□□ -0.2
PTPN7-216ENST00000492977 SUN2Q9UH99 717 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 EIF2B4Q9UI10 523 aaKnown RBP13.82□□□□□ -0.2
PTPN7-216ENST00000492977 ANKRD12Q6UB98 2062 aa13.82□□□□□ -0.2
PTPN7-216ENST00000492977 DOCK8Q8NF50 2099 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 WNT9AO14904 365 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 CHUKO15111 745 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 CHEK2O96017 543 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 LMNAP02545 664 aaKnown RBP13.81□□□□□ -0.2
PTPN7-216ENST00000492977 HLA-EP13747 358 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 MSH3P20585 1137 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 FOXA1P55317 472 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 IRX1P78414 480 aaPredicted RBP13.81□□□□□ -0.2
PTPN7-216ENST00000492977 CUL3Q13618 768 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 RBBP7Q16576 425 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 POM121L1PQ3SYA9 428 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 FBXO48Q5FWF7 155 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 PLEKHS1Q5SXH7 462 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 FBXL19Q6PCT2 694 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 SERPINA13PQ6UXR4 307 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 GPRIN3Q6ZVF9 776 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 NUDT18Q6ZVK8 323 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 CYP2U1Q7Z449 544 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 DSG4Q86SJ6 1040 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 SYVN1Q86TM6 617 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 SNX32Q86XE0 403 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 ULK2Q8IYT8 1036 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 SUSD6Q92537 303 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 MYADMQ96S97 322 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 PLA2G2FQ9BZM2 168 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 ABCG8Q9H221 673 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 THAP10Q9P2Z0 257 aaPredicted RBP13.81□□□□□ -0.2
PTPN7-216ENST00000492977 ADAMTS6Q9UKP5 1117 aa13.81□□□□□ -0.2
PTPN7-216ENST00000492977 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.81□□□□□ -0.2
PTPN7-216ENST00000492977 MEI4A8MW99 385 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 PIP5K1BO14986 540 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 NUAK1O60285 661 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 CIB2O75838 187 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 FTH1P02794 183 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 MPC1LP0DKB6 136 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 ITGAXP20702 1163 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 GRIA2P42262 883 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 GRM2Q14416 872 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 GRIN2CQ14957 1233 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 ACOX1Q15067 660 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 MAPRE2Q15555 327 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 C6orf163Q5TEZ5 329 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 TTC23LQ6PF05 361 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 NEK10Q6ZWH5 1172 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 NET1Q7Z628 596 aaPredicted RBP13.8□□□□□ -0.2
PTPN7-216ENST00000492977 DDIASQ8IXT1 998 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 ST13P5Q8NFI4 369 aaPredicted RBP13.8□□□□□ -0.2
PTPN7-216ENST00000492977 UBTD2Q8WUN7 234 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 ARRDC3Q96B67 414 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 MARK4Q96L34 752 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 C3orf30Q96M34 536 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 COQ10AQ96MF6 247 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 FAM161BQ96MY7 647 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 S1PR5Q9H228 398 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 AKTIPQ9H8T0 292 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 NDE1Q9NXR1 346 aa13.8□□□□□ -0.2
PTPN7-216ENST00000492977 TSR3Q9UJK0 312 aaKnown RBP13.8□□□□□ -0.2
PTPN7-216ENST00000492977 TCF20Q9UGU0 1960 aaKnown RBP13.8□□□□□ -0.2
PTPN7-216ENST00000492977 A0A088AWK7 358 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 A0A1B0GTL3 188 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 FADS2P1A8MWK0 482 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 AREL1O15033 823 aa13.79□□□□□ -0.2
PTPN7-216ENST00000492977 KAT7O95251 611 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms