RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 COL13A1Q5TAT6 717 aaPredicted RBP16.44■□□□□ 0.22
CTSA-207ENST00000484855 KANK2Q63ZY3 851 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 CYHR1Q6ZMK1 362 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 ERN2Q76MJ5 926 aaKnown RBP16.44■□□□□ 0.22
CTSA-207ENST00000484855 PARP9Q8IXQ6 854 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 RAVER1Q8IY67 606 aaKnown RBP16.44■□□□□ 0.22
CTSA-207ENST00000484855 OR56A4Q8NGH8 313 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 FBXO27Q8NI29 283 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 BTN2A2Q8WVV5 523 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 C19orf60Q96EN9 201 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 MARK4Q96L34 752 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 ZNF385DQ9H6B1 395 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 ZBTB26Q9HCK0 441 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 LMCD1Q9NZU5 365 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 ASB1Q9Y576 335 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 TNPO3Q9Y5L0 923 aaKnown RBP16.44■□□□□ 0.22
CTSA-207ENST00000484855 MEI4A8MW99 385 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 EIF3FO00303 357 aaPredicted RBP16.44■□□□□ 0.22
CTSA-207ENST00000484855 E2F3O00716 465 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 CRCPO75575 148 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 GUCA1CO95843 209 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 FOXA1P55317 472 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 UGT3A2Q3SY77 523 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 CYP2U1Q7Z449 544 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 PACS2Q86VP3 889 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 CPSF7Q8N684 471 aaKnown RBP16.44■□□□□ 0.22
CTSA-207ENST00000484855 TWIST2Q8WVJ9 160 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 GLYATL1Q969I3 302 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 KCNA7Q96RP8 456 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 EGFL8Q99944 293 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 HGH1Q9BTY7 390 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 DNAJC15Q9Y5T4 150 aa16.44■□□□□ 0.22
CTSA-207ENST00000484855 GIPC1O14908 333 aa16.43■□□□□ 0.22
CTSA-207ENST00000484855 SLC22A2O15244 555 aa16.43■□□□□ 0.22
CTSA-207ENST00000484855 FTH1P02794 183 aa16.43■□□□□ 0.22
CTSA-207ENST00000484855 COX4I1P13073 169 aa16.43■□□□□ 0.22
CTSA-207ENST00000484855 C6P13671 934 aa16.43■□□□□ 0.22
CTSA-207ENST00000484855 VCLP18206 1134 aa16.43■□□□□ 0.22
CTSA-207ENST00000484855 PIK3R1P27986 724 aa16.43■□□□□ 0.22
CTSA-207ENST00000484855 HSPA14Q0VDF9 509 aa16.43■□□□□ 0.22
CTSA-207ENST00000484855 BOP1Q14137 746 aaKnown RBP16.43■□□□□ 0.22
CTSA-207ENST00000484855 PCBP2Q15366 365 aaKnown RBP eCLIP16.43■□□□□ 0.223e-6■■■■□ 25.7
CTSA-207ENST00000484855 PHKG1Q16816 387 aa16.43■□□□□ 0.22
CTSA-207ENST00000484855 DNAL1Q4LDG9 190 aa16.43■□□□□ 0.22
CTSA-207ENST00000484855 ZNF648Q5T619 568 aaPredicted RBP16.43■□□□□ 0.22
CTSA-207ENST00000484855 NUS1Q96E22 293 aa16.43■□□□□ 0.22
CTSA-207ENST00000484855 STON1Q9Y6Q2 735 aa16.43■□□□□ 0.22
CTSA-207ENST00000484855 A0A1B0GTL3 188 aa16.43■□□□□ 0.22
CTSA-207ENST00000484855 QSOX1O00391 747 aa16.43■□□□□ 0.22
CTSA-207ENST00000484855 LTBRP36941 435 aa16.43■□□□□ 0.22
CTSA-207ENST00000484855 C18orf21Q32NC0 220 aaPredicted RBP16.43■□□□□ 0.22
CTSA-207ENST00000484855 PLEKHS1Q5SXH7 462 aa16.43■□□□□ 0.22
CTSA-207ENST00000484855 FAM46CQ5VWP2 391 aa16.43■□□□□ 0.22
CTSA-207ENST00000484855 SYVN1Q86TM6 617 aa16.43■□□□□ 0.22
CTSA-207ENST00000484855 CHPFQ8IZ52 775 aa16.43■□□□□ 0.22
CTSA-207ENST00000484855 ARHGAP24Q8N264 748 aa16.43■□□□□ 0.22
CTSA-207ENST00000484855 PELI3Q8N2H9 469 aa16.43■□□□□ 0.22
CTSA-207ENST00000484855 FAM13CQ8NE31 585 aa16.43■□□□□ 0.22
CTSA-207ENST00000484855 C1orf21Q9H246 121 aa16.43■□□□□ 0.22
CTSA-207ENST00000484855 FBRSL1Q9HCM7 1045 aaKnown RBP16.43■□□□□ 0.22
CTSA-207ENST00000484855 COPG1Q9Y678 874 aaKnown RBP16.43■□□□□ 0.22
CTSA-207ENST00000484855 ATG2BQ96BY7 2078 aa16.42■□□□□ 0.22
CTSA-207ENST00000484855 OR2AG2A6NM03 316 aa16.42■□□□□ 0.22
CTSA-207ENST00000484855 KPNA5O15131 536 aa16.42■□□□□ 0.22
CTSA-207ENST00000484855 INPP4BO15327 924 aa16.42■□□□□ 0.22
CTSA-207ENST00000484855 SGTAO43765 313 aa16.42■□□□□ 0.22
CTSA-207ENST00000484855 LZTS3O60299 673 aaPredicted RBP16.42■□□□□ 0.22
CTSA-207ENST00000484855 MMP20O60882 483 aa16.42■□□□□ 0.22
CTSA-207ENST00000484855 RECQL5O94762 991 aaPredicted RBP16.42■□□□□ 0.22
CTSA-207ENST00000484855 ADSLP30566 484 aaPredicted RBP16.42■□□□□ 0.22
CTSA-207ENST00000484855 P2RY2P41231 377 aa16.42■□□□□ 0.22
CTSA-207ENST00000484855 WASP42768 502 aa16.42■□□□□ 0.22
CTSA-207ENST00000484855 GBX1Q14549 363 aa16.42■□□□□ 0.22
CTSA-207ENST00000484855 TMEM52BQ4KMG9 183 aa16.42■□□□□ 0.22
CTSA-207ENST00000484855 ZNF765Q7L2R6 523 aa16.42■□□□□ 0.22
CTSA-207ENST00000484855 PHYKPLQ8IUZ5 450 aa16.42■□□□□ 0.22
CTSA-207ENST00000484855 ZNF513Q8N8E2 541 aaPredicted RBP16.42■□□□□ 0.22
CTSA-207ENST00000484855 CSGALNACT1Q8TDX6 532 aa16.42■□□□□ 0.22
CTSA-207ENST00000484855 SKA2Q8WVK7 121 aaPredicted RBP16.42■□□□□ 0.22
CTSA-207ENST00000484855 ELMO1Q92556 727 aa16.42■□□□□ 0.22
CTSA-207ENST00000484855 DLG3Q92796 817 aa16.42■□□□□ 0.22
CTSA-207ENST00000484855 MSLNLQ96KJ4 702 aa16.42■□□□□ 0.22
CTSA-207ENST00000484855 LENG8Q96PV6 779 aaPredicted RBP16.42■□□□□ 0.22
CTSA-207ENST00000484855 HDAC8Q9BY41 377 aa16.42■□□□□ 0.22
CTSA-207ENST00000484855 RDH14Q9HBH5 336 aa16.42■□□□□ 0.22
CTSA-207ENST00000484855 WWOXQ9NZC7 414 aa16.42■□□□□ 0.22
CTSA-207ENST00000484855 PTBP2Q9UKA9 531 aaKnown RBP16.42■□□□□ 0.22
CTSA-207ENST00000484855 SPTBN5Q9NRC6 3674 aaKnown RBP16.42■□□□□ 0.22
CTSA-207ENST00000484855 LOC100653049A0A140TA62 436 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 PIP5K1BO14986 540 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 NUAK1O60285 661 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 KRT34O76011 436 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 ATP6V1G2O95670 118 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 ESRRBO95718 433 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 EZRP15311 586 aaKnown RBP16.41■□□□□ 0.22
CTSA-207ENST00000484855 PRDX3P30048 256 aaKnown RBP16.41■□□□□ 0.22
CTSA-207ENST00000484855 SULT1C3Q6IMI6 304 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 GPRIN3Q6ZVF9 776 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 CHSY3Q70JA7 882 aa16.41■□□□□ 0.22
CTSA-207ENST00000484855 GOLGA7Q7Z5G4 137 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms