RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 RASGEF1AQ8N9B8 481 aa16.88■□□□□ 0.29
HMGN1-210ENST00000464078 Q8NA96 180 aa16.88■□□□□ 0.29
HMGN1-210ENST00000464078 SLC38A9Q8NBW4 561 aa16.88■□□□□ 0.29
HMGN1-210ENST00000464078 MR1Q95460 341 aa16.88■□□□□ 0.29
HMGN1-210ENST00000464078 GLOD4Q9HC38 313 aa16.88■□□□□ 0.29
HMGN1-210ENST00000464078 KCND1Q9NSA2 647 aa16.88■□□□□ 0.29
HMGN1-210ENST00000464078 SMOXQ9NWM0 555 aa16.88■□□□□ 0.29
HMGN1-210ENST00000464078 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.88■□□□□ 0.29
HMGN1-210ENST00000464078 CAPN11Q9UMQ6 739 aa16.88■□□□□ 0.29
HMGN1-210ENST00000464078 SEC16AO15027 2179 aa16.88■□□□□ 0.29
HMGN1-210ENST00000464078 A0A0A6YYK5 440 aaPredicted RBP16.87■□□□□ 0.29
HMGN1-210ENST00000464078 UBA6A0AVT1 1052 aaPredicted RBP16.87■□□□□ 0.29
HMGN1-210ENST00000464078 GOLGA6L22H0YM25 854 aa16.87■□□□□ 0.29
HMGN1-210ENST00000464078 APOL1O14791 398 aa16.87■□□□□ 0.29
HMGN1-210ENST00000464078 SERPINC1P01008 464 aa16.87■□□□□ 0.29
HMGN1-210ENST00000464078 H2AFZP0C0S5 128 aa16.87■□□□□ 0.29
HMGN1-210ENST00000464078 CCL11P51671 97 aa16.87■□□□□ 0.29
HMGN1-210ENST00000464078 NFKBIBQ15653 356 aa16.87■□□□□ 0.29
HMGN1-210ENST00000464078 GPR19Q15760 415 aa16.87■□□□□ 0.29
HMGN1-210ENST00000464078 TEX44Q53QW1 395 aa16.87■□□□□ 0.29
HMGN1-210ENST00000464078 TMTC4Q5T4D3 741 aa16.87■□□□□ 0.29
HMGN1-210ENST00000464078 ZFYVE27Q5T4F4 411 aa16.87■□□□□ 0.29
HMGN1-210ENST00000464078 METRNLQ641Q3 311 aa16.87■□□□□ 0.29
HMGN1-210ENST00000464078 H2AFVQ71UI9 128 aa16.87■□□□□ 0.29
HMGN1-210ENST00000464078 OOSP2Q86WS3 158 aa16.87■□□□□ 0.29
HMGN1-210ENST00000464078 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.87■□□□□ 0.29
HMGN1-210ENST00000464078 CTNNBL1Q8WYA6 563 aaPredicted RBP16.87■□□□□ 0.29
HMGN1-210ENST00000464078 NLNQ9BYT8 704 aa16.87■□□□□ 0.29
HMGN1-210ENST00000464078 SLC29A3Q9BZD2 475 aa16.87■□□□□ 0.29
HMGN1-210ENST00000464078 CHST8Q9H2A9 424 aa16.87■□□□□ 0.29
HMGN1-210ENST00000464078 BPIFA1Q9NP55 256 aa16.87■□□□□ 0.29
HMGN1-210ENST00000464078 IMP3Q9NV31 184 aaKnown RBP16.87■□□□□ 0.29
HMGN1-210ENST00000464078 HRASLS2Q9NWW9 162 aa16.87■□□□□ 0.29
HMGN1-210ENST00000464078 HACD3Q9P035 362 aa16.87■□□□□ 0.29
HMGN1-210ENST00000464078 IL17CQ9P0M4 197 aa16.87■□□□□ 0.29
HMGN1-210ENST00000464078 SNX7Q9UNH6 387 aa16.87■□□□□ 0.29
HMGN1-210ENST00000464078 PSMD13Q9UNM6 376 aa16.87■□□□□ 0.29
HMGN1-210ENST00000464078 SPTBP11277 2137 aa16.87■□□□□ 0.29
HMGN1-210ENST00000464078 LOC285095A0A1B0GVY8 99 aa16.86■□□□□ 0.29
HMGN1-210ENST00000464078 KLHL33A6NCF5 533 aa16.86■□□□□ 0.29
HMGN1-210ENST00000464078 TCP11X1B4DZS4 312 aa16.86■□□□□ 0.29
HMGN1-210ENST00000464078 PMPCBO75439 489 aa16.86■□□□□ 0.29
HMGN1-210ENST00000464078 TMEM63AO94886 807 aa16.86■□□□□ 0.29
HMGN1-210ENST00000464078 EPOP01588 193 aa16.86■□□□□ 0.29
HMGN1-210ENST00000464078 KLK3P07288 261 aaPredicted RBP16.86■□□□□ 0.29
HMGN1-210ENST00000464078 MSL3P1P0C860 447 aa16.86■□□□□ 0.29
HMGN1-210ENST00000464078 ZFXP17010 805 aaPredicted RBP16.86■□□□□ 0.29
HMGN1-210ENST00000464078 RORAP35398 523 aa16.86■□□□□ 0.29
HMGN1-210ENST00000464078 SPAM1P38567 509 aa16.86■□□□□ 0.29
HMGN1-210ENST00000464078 NFE2L1Q14494 772 aa16.86■□□□□ 0.29
HMGN1-210ENST00000464078 IQCB1Q15051 598 aa16.86■□□□□ 0.29
HMGN1-210ENST00000464078 PRR30Q53SZ7 412 aaPredicted RBP16.86■□□□□ 0.29
HMGN1-210ENST00000464078 FAM182AQ5T1J6 154 aa16.86■□□□□ 0.29
HMGN1-210ENST00000464078 GPRC6AQ5T6X5 926 aa16.86■□□□□ 0.29
HMGN1-210ENST00000464078 RHOT1Q8IXI2 618 aa16.86■□□□□ 0.29
HMGN1-210ENST00000464078 DSELQ8IZU8 1212 aa16.86■□□□□ 0.29
HMGN1-210ENST00000464078 CPT1BQ92523 772 aa16.86■□□□□ 0.29
HMGN1-210ENST00000464078 PNPLA2Q96AD5 504 aa16.86■□□□□ 0.29
HMGN1-210ENST00000464078 TEKT5Q96M29 485 aa16.86■□□□□ 0.29
HMGN1-210ENST00000464078 KIR3DX1Q9H7L2 352 aa16.86■□□□□ 0.29
HMGN1-210ENST00000464078 TMEM63CQ9P1W3 806 aa16.86■□□□□ 0.29
HMGN1-210ENST00000464078 SLC24A2Q9UI40 661 aa16.86■□□□□ 0.29
HMGN1-210ENST00000464078 TCFL5Q9UL49 500 aa16.86■□□□□ 0.29
HMGN1-210ENST00000464078 G3BP2Q9UN86 482 aaKnown RBP16.86■□□□□ 0.29
HMGN1-210ENST00000464078 LUC7L2Q9Y383 392 aaKnown RBP16.86■□□□□ 0.29
HMGN1-210ENST00000464078 CACNA1DQ01668 2161 aa16.86■□□□□ 0.29
HMGN1-210ENST00000464078 POLEQ07864 2286 aa16.85■□□□□ 0.29
HMGN1-210ENST00000464078 GLYATL1P3A0A0U1RQE8 302 aa16.85■□□□□ 0.29
HMGN1-210ENST00000464078 MEN1O00255 615 aa16.85■□□□□ 0.29
HMGN1-210ENST00000464078 GAPDHSO14556 408 aaPredicted RBP16.85■□□□□ 0.29
HMGN1-210ENST00000464078 GPR39O43194 453 aa16.85■□□□□ 0.29
HMGN1-210ENST00000464078 PTPN3P26045 913 aa16.85■□□□□ 0.29
HMGN1-210ENST00000464078 XRCC4Q13426 336 aa16.85■□□□□ 0.29
HMGN1-210ENST00000464078 ITGA9Q13797 1035 aa16.85■□□□□ 0.29
HMGN1-210ENST00000464078 PRKD1Q15139 912 aaPredicted RBP16.85■□□□□ 0.29
HMGN1-210ENST00000464078 PLEKHS1Q5SXH7 462 aa16.85■□□□□ 0.29
HMGN1-210ENST00000464078 SLC6A19Q695T7 634 aa16.85■□□□□ 0.29
HMGN1-210ENST00000464078 KDELC1Q6UW63 502 aa16.85■□□□□ 0.29
HMGN1-210ENST00000464078 FAM198BQ6UWH4 519 aa16.85■□□□□ 0.29
HMGN1-210ENST00000464078 MED25Q71SY5 747 aa16.85■□□□□ 0.29
HMGN1-210ENST00000464078 BEND7Q8N7W2 519 aaPredicted RBP16.85■□□□□ 0.29
HMGN1-210ENST00000464078 ENDOVQ8N8Q3 282 aaKnown RBP16.85■□□□□ 0.29
HMGN1-210ENST00000464078 TMEM102Q8N9M5 508 aaPredicted RBP16.85■□□□□ 0.29
HMGN1-210ENST00000464078 GLIS1Q8NBF1 620 aa16.85■□□□□ 0.29
HMGN1-210ENST00000464078 SYTL2Q9HCH5 934 aa16.85■□□□□ 0.29
HMGN1-210ENST00000464078 FAM153AQ9UHL3 310 aa16.85■□□□□ 0.29
HMGN1-210ENST00000464078 ACSL5Q9ULC5 683 aa16.85■□□□□ 0.29
HMGN1-210ENST00000464078 WIPF3A6NGB9 483 aa16.84■□□□□ 0.29
HMGN1-210ENST00000464078 OR2AG2A6NM03 316 aa16.84■□□□□ 0.29
HMGN1-210ENST00000464078 GYPCP04921 128 aa16.84■□□□□ 0.29
HMGN1-210ENST00000464078 CAPN1P07384 714 aa16.84■□□□□ 0.29
HMGN1-210ENST00000464078 HNRNPH3P31942 346 aaKnown RBP16.84■□□□□ 0.29
HMGN1-210ENST00000464078 KPNA2P52292 529 aaKnown RBP16.84■□□□□ 0.29
HMGN1-210ENST00000464078 VAV2P52735 878 aa16.84■□□□□ 0.29
HMGN1-210ENST00000464078 RRADP55042 308 aa16.84■□□□□ 0.29
HMGN1-210ENST00000464078 WNT3AP56704 352 aa16.84■□□□□ 0.29
HMGN1-210ENST00000464078 PPP2R5EQ16537 467 aa16.84■□□□□ 0.29
HMGN1-210ENST00000464078 LONRF2Q1L5Z9 754 aa16.84■□□□□ 0.29
HMGN1-210ENST00000464078 SIRPB2Q5JXA9 342 aa16.84■□□□□ 0.29
HMGN1-210ENST00000464078 LRRC38Q5VT99 294 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms