RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 SPATA13Q96N96 652 aa22.3■■□□□ 1.16
PTPN4-207ENST00000460162 C19orf43Q9BQ61 176 aa22.3■■□□□ 1.16
PTPN4-207ENST00000460162 SEMA5BQ9P283 1151 aa22.3■■□□□ 1.16
PTPN4-207ENST00000460162 IL17BQ9UHF5 180 aa22.3■■□□□ 1.16
PTPN4-207ENST00000460162 RPS6KL1Q9Y6S9 549 aa22.3■■□□□ 1.16
PTPN4-207ENST00000460162 KCNN4O15554 427 aa22.29■■□□□ 1.16
PTPN4-207ENST00000460162 SRP72O76094 671 aaKnown RBP22.29■■□□□ 1.16
PTPN4-207ENST00000460162 MTHFD1P11586 935 aaKnown RBP22.29■■□□□ 1.16
PTPN4-207ENST00000460162 FGF5P12034 268 aa22.29■■□□□ 1.16
PTPN4-207ENST00000460162 ZNF28P17035 718 aa22.29■■□□□ 1.16
PTPN4-207ENST00000460162 NELFEP18615 380 aaKnown RBP22.29■■□□□ 1.16
PTPN4-207ENST00000460162 PBLDP30039 288 aaPredicted RBP22.29■■□□□ 1.16
PTPN4-207ENST00000460162 NAP1L1P55209 391 aaKnown RBP22.29■■□□□ 1.16
PTPN4-207ENST00000460162 PTPRCAPQ14761 206 aa22.29■■□□□ 1.16
PTPN4-207ENST00000460162 PLCL1Q15111 1095 aa22.29■■□□□ 1.16
PTPN4-207ENST00000460162 METRNLQ641Q3 311 aa22.29■■□□□ 1.16
PTPN4-207ENST00000460162 RASGRP3Q8IV61 690 aa22.29■■□□□ 1.16
PTPN4-207ENST00000460162 OR4K2Q8NGD2 314 aa22.29■■□□□ 1.16
PTPN4-207ENST00000460162 CLMPQ9H6B4 373 aa22.29■■□□□ 1.16
PTPN4-207ENST00000460162 IMP3Q9NV31 184 aaKnown RBP22.29■■□□□ 1.16
PTPN4-207ENST00000460162 FKBPLQ9UIM3 349 aa22.29■■□□□ 1.16
PTPN4-207ENST00000460162 PSMD13Q9UNM6 376 aa22.29■■□□□ 1.16
PTPN4-207ENST00000460162 MGAT4DA6NG13 374 aa22.28■■□□□ 1.16
PTPN4-207ENST00000460162 TERTO14746 1132 aaKnown RBP22.28■■□□□ 1.16
PTPN4-207ENST00000460162 NKX2-8O15522 239 aa22.28■■□□□ 1.16
PTPN4-207ENST00000460162 SUV39H1O43463 412 aa22.28■■□□□ 1.16
PTPN4-207ENST00000460162 TJP3O95049 919 aa22.28■■□□□ 1.16
PTPN4-207ENST00000460162 WISP1O95388 367 aa22.28■■□□□ 1.16
PTPN4-207ENST00000460162 CRTAMO95727 393 aa22.28■■□□□ 1.16
PTPN4-207ENST00000460162 PRKAR1AP10644 381 aa22.28■■□□□ 1.16
PTPN4-207ENST00000460162 PYGMP11217 842 aa22.28■■□□□ 1.16
PTPN4-207ENST00000460162 ZNF75DP51815 510 aa22.28■■□□□ 1.16
PTPN4-207ENST00000460162 NFKB2Q00653 900 aa22.28■■□□□ 1.16
PTPN4-207ENST00000460162 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.28■■□□□ 1.16
PTPN4-207ENST00000460162 BCL7AQ4VC05 210 aa22.28■■□□□ 1.16
PTPN4-207ENST00000460162 C6orf15Q6UXA7 325 aaPredicted RBP22.28■■□□□ 1.16
PTPN4-207ENST00000460162 PPP1R3BQ86XI6 285 aa22.28■■□□□ 1.16
PTPN4-207ENST00000460162 BEND7Q8N7W2 519 aaPredicted RBP22.28■■□□□ 1.16
PTPN4-207ENST00000460162 OR2L2Q8NH16 312 aa22.28■■□□□ 1.16
PTPN4-207ENST00000460162 LRRC45Q96CN5 670 aa22.28■■□□□ 1.16
PTPN4-207ENST00000460162 STAMBPL1Q96FJ0 436 aa22.28■■□□□ 1.16
PTPN4-207ENST00000460162 SLC41A2Q96JW4 573 aa22.28■■□□□ 1.16
PTPN4-207ENST00000460162 CD180Q99467 661 aa22.28■■□□□ 1.16
PTPN4-207ENST00000460162 APOL2Q9BQE5 337 aa22.28■■□□□ 1.16
PTPN4-207ENST00000460162 ASB8Q9H765 288 aa22.28■■□□□ 1.16
PTPN4-207ENST00000460162 FEZ2Q9UHY8 353 aaPredicted RBP22.28■■□□□ 1.16
PTPN4-207ENST00000460162 AGAP14A8MT82 685 aa22.27■■□□□ 1.16
PTPN4-207ENST00000460162 PYCARD-AS1I3L0S3 204 aa22.27■■□□□ 1.16
PTPN4-207ENST00000460162 TCN2P20062 427 aa22.27■■□□□ 1.16
PTPN4-207ENST00000460162 OAS2P29728 719 aaKnown RBP22.27■■□□□ 1.16
PTPN4-207ENST00000460162 PPP1CAP62136 330 aa22.27■■□□□ 1.16
PTPN4-207ENST00000460162 DARS2Q6PI48 645 aaKnown RBP22.27■■□□□ 1.16
PTPN4-207ENST00000460162 DET1Q7L5Y6 550 aa22.27■■□□□ 1.16
PTPN4-207ENST00000460162 ALG3Q92685 438 aa22.27■■□□□ 1.16
PTPN4-207ENST00000460162 ULK4Q96C45 1275 aa22.27■■□□□ 1.16
PTPN4-207ENST00000460162 LINC00615Q96LM1 132 aaPredicted RBP22.27■■□□□ 1.16
PTPN4-207ENST00000460162 ACSL5Q9ULC5 683 aa22.27■■□□□ 1.16
PTPN4-207ENST00000460162 REXO2Q9Y3B8 237 aaKnown RBP22.27■■□□□ 1.16
PTPN4-207ENST00000460162 DUSP10Q9Y6W6 482 aa22.27■■□□□ 1.16
PTPN4-207ENST00000460162 UBR5O95071 2799 aaPredicted RBP22.27■■□□□ 1.15
PTPN4-207ENST00000460162 TLCD2A6NGC4 264 aa22.26■■□□□ 1.15
PTPN4-207ENST00000460162 KIAA0754O94854 1291 aa22.26■■□□□ 1.15
PTPN4-207ENST00000460162 MT-ND3P03897 115 aa22.26■■□□□ 1.15
PTPN4-207ENST00000460162 SLC35G4P0C7Q5 338 aa22.26■■□□□ 1.15
PTPN4-207ENST00000460162 RALBP11234 206 aa22.26■■□□□ 1.15
PTPN4-207ENST00000460162 DLSTP36957 453 aa22.26■■□□□ 1.15
PTPN4-207ENST00000460162 VAV2P52735 878 aa22.26■■□□□ 1.15
PTPN4-207ENST00000460162 ZNF140P52738 457 aaPredicted RBP22.26■■□□□ 1.15
PTPN4-207ENST00000460162 XIAPP98170 497 aa22.26■■□□□ 1.15
PTPN4-207ENST00000460162 KCNC4Q03721 635 aa22.26■■□□□ 1.15
PTPN4-207ENST00000460162 OLIG2Q13516 323 aa22.26■■□□□ 1.15
PTPN4-207ENST00000460162 KMT5CQ86Y97 462 aa22.26■■□□□ 1.15
PTPN4-207ENST00000460162 KLHDC8BQ8IXV7 354 aa22.26■■□□□ 1.15
PTPN4-207ENST00000460162 LRRC57Q8N9N7 239 aa22.26■■□□□ 1.15
PTPN4-207ENST00000460162 GALNT6Q8NCL4 622 aa22.26■■□□□ 1.15
PTPN4-207ENST00000460162 CCDC110Q8TBZ0 833 aa22.26■■□□□ 1.15
PTPN4-207ENST00000460162 ZFPM2Q8WW38 1151 aa22.26■■□□□ 1.15
PTPN4-207ENST00000460162 FAM118BQ9BPY3 351 aa22.26■■□□□ 1.15
PTPN4-207ENST00000460162 WWP1Q9H0M0 922 aa22.26■■□□□ 1.15
PTPN4-207ENST00000460162 PDE7BQ9NP56 450 aa22.26■■□□□ 1.15
PTPN4-207ENST00000460162 LNPEPQ9UIQ6 1025 aa22.26■■□□□ 1.15
PTPN4-207ENST00000460162 CRLS1Q9UJA2 301 aa22.26■■□□□ 1.15
PTPN4-207ENST00000460162 GRID2IPA4D2P6 1211 aa22.25■■□□□ 1.15
PTPN4-207ENST00000460162 OR5K3A6NET4 321 aa22.25■■□□□ 1.15
PTPN4-207ENST00000460162 SPAG6O75602 509 aa22.25■■□□□ 1.15
PTPN4-207ENST00000460162 ITGALP20701 1170 aa22.25■■□□□ 1.15
PTPN4-207ENST00000460162 HADHAP40939 763 aa22.25■■□□□ 1.15
PTPN4-207ENST00000460162 PRLHRP49683 370 aa22.25■■□□□ 1.15
PTPN4-207ENST00000460162 CSRP3P50461 194 aa22.25■■□□□ 1.15
PTPN4-207ENST00000460162 MSLNQ13421 630 aaPredicted RBP22.25■■□□□ 1.15
PTPN4-207ENST00000460162 TUBB3Q13509 450 aa22.25■■□□□ 1.15
PTPN4-207ENST00000460162 DNTTIP2Q5QJE6 756 aaKnown RBP22.25■■□□□ 1.15
PTPN4-207ENST00000460162 RAD9BQ6WBX8 426 aa22.25■■□□□ 1.15
PTPN4-207ENST00000460162 OOSP2Q86WS3 158 aa22.25■■□□□ 1.15
PTPN4-207ENST00000460162 SIDT2Q8NBJ9 832 aaKnown RBP22.25■■□□□ 1.15
PTPN4-207ENST00000460162 OR13C4Q8NGS5 318 aa22.25■■□□□ 1.15
PTPN4-207ENST00000460162 HEXDCQ8WVB3 486 aa22.25■■□□□ 1.15
PTPN4-207ENST00000460162 APOBEC4Q8WW27 367 aaKnown RBP22.25■■□□□ 1.15
PTPN4-207ENST00000460162 DCUN1D1Q96GG9 259 aa22.25■■□□□ 1.15
PTPN4-207ENST00000460162 ELMO2Q96JJ3 720 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms