RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 LINC01559Q495D7 138 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 EMC4Q5J8M3 183 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 SEZ6L2Q6UXD5 910 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 MARK2Q7KZI7 788 aaKnown RBP6.91□□□□□ -1.3
SSXP3-201ENST00000442971 ADGRG6Q86SQ4 1221 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 SETD3Q86TU7 594 aaPredicted RBP6.91□□□□□ -1.3
SSXP3-201ENST00000442971 TAC4Q86UU9 113 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 GALNT13Q8IUC8 556 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 KBTBD2Q8IY47 623 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 OR11G2Q8NGC1 345 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 CELF6Q96J87 481 aaKnown RBP6.91□□□□□ -1.3
SSXP3-201ENST00000442971 CDK15Q96Q40 435 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 DNAI2Q9GZS0 605 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 MRPL44Q9H9J2 332 aaKnown RBP6.91□□□□□ -1.3
SSXP3-201ENST00000442971 UBTD1Q9HAC8 227 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 KIAA1586Q9HCI6 787 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 POT1Q9NUX5 634 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 ZNF701Q9NV72 531 aaPredicted RBP6.91□□□□□ -1.3
SSXP3-201ENST00000442971 TMEM98Q9Y2Y6 226 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 YLPM1P49750 1951 aaKnown RBP6.9□□□□□ -1.3
SSXP3-201ENST00000442971 UBA6A0AVT1 1052 aaPredicted RBP6.9□□□□□ -1.3
SSXP3-201ENST00000442971 TMEM150CB9EJG8 249 aa6.9□□□□□ -1.3
SSXP3-201ENST00000442971 UBFD1O14562 309 aaKnown RBP6.9□□□□□ -1.3
SSXP3-201ENST00000442971 ZNF749O43361 778 aa6.9□□□□□ -1.3
SSXP3-201ENST00000442971 LMX1BO60663 402 aa6.9□□□□□ -1.3
SSXP3-201ENST00000442971 ZBTB11O95625 1053 aaPredicted RBP6.9□□□□□ -1.3
SSXP3-201ENST00000442971 FYNP06241 537 aa6.9□□□□□ -1.3
SSXP3-201ENST00000442971 SP1P08047 785 aa6.9□□□□□ -1.3
SSXP3-201ENST00000442971 ELFN1P0C7U0 828 aa6.9□□□□□ -1.3
SSXP3-201ENST00000442971 EEF1DP29692 281 aaKnown RBP6.9□□□□□ -1.3
SSXP3-201ENST00000442971 RAD51Q06609 339 aa6.9□□□□□ -1.3
SSXP3-201ENST00000442971 HDAC1Q13547 482 aaPredicted RBP6.9□□□□□ -1.3
SSXP3-201ENST00000442971 GOLGA7BQ2TAP0 167 aa6.9□□□□□ -1.3
SSXP3-201ENST00000442971 ATXN7L2Q5T6C5 722 aaPredicted RBP6.9□□□□□ -1.3
SSXP3-201ENST00000442971 FBXO38Q6PIJ6 1188 aa6.9□□□□□ -1.3
SSXP3-201ENST00000442971 LIPIQ6XZB0 460 aa6.9□□□□□ -1.3
SSXP3-201ENST00000442971 C20orf204Q6ZNR8 217 aa6.9□□□□□ -1.3
SSXP3-201ENST00000442971 CHST15Q7LFX5 561 aaPredicted RBP6.9□□□□□ -1.3
SSXP3-201ENST00000442971 OTOAQ7RTW8 1153 aa6.9□□□□□ -1.3
SSXP3-201ENST00000442971 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.9□□□□□ -1.3
SSXP3-201ENST00000442971 TRIM48Q8IWZ4 208 aa6.9□□□□□ -1.3
SSXP3-201ENST00000442971 SMYD4Q8IYR2 804 aaPredicted RBP6.9□□□□□ -1.3
SSXP3-201ENST00000442971 IRGQQ8WZA9 623 aa6.9□□□□□ -1.3
SSXP3-201ENST00000442971 VPS50Q96JG6 964 aa6.9□□□□□ -1.3
SSXP3-201ENST00000442971 TTYH2Q9BSA4 534 aa6.9□□□□□ -1.3
SSXP3-201ENST00000442971 TLR10Q9BXR5 811 aa6.9□□□□□ -1.3
SSXP3-201ENST00000442971 ATG10Q9H0Y0 220 aa6.9□□□□□ -1.3
SSXP3-201ENST00000442971 ZNF160Q9HCG1 818 aa6.9□□□□□ -1.3
SSXP3-201ENST00000442971 KLHL1Q9NR64 748 aa6.9□□□□□ -1.3
SSXP3-201ENST00000442971 KCNK6Q9Y257 313 aa6.9□□□□□ -1.3
SSXP3-201ENST00000442971 VNN1O95497 513 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 HPP00738 406 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 PRR35P0CG20 571 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 GLI4P10075 376 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 ZNF24P17028 368 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 FDXRP22570 491 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 IGFBP5P24593 272 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 ETFBP38117 255 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 UBA7P41226 1012 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 ASCL1P50553 236 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 DCDP81605 110 aaKnown RBP6.89□□□□□ -1.31
SSXP3-201ENST00000442971 COL10A1Q03692 680 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 CYP24A1Q07973 514 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 RALGDSQ12967 914 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 STK3Q13188 491 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 SNRNP35Q16560 246 aaKnown RBP6.89□□□□□ -1.31
SSXP3-201ENST00000442971 ZNF394Q53GI3 561 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 ALFQ53S48 1182 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 AWAT1Q58HT5 328 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 RNFT1Q5M7Z0 435 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 DNTTIP2Q5QJE6 756 aaKnown RBP6.89□□□□□ -1.31
SSXP3-201ENST00000442971 FAM120AOSQ5T036 256 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 GPRC6AQ5T6X5 926 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 C1orf189Q5VU69 101 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 KIF18BQ86Y91 864 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 FNIP1Q8TF40 1166 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 CDK5RAP3Q96JB5 506 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 CD180Q99467 661 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 HES7Q9BYE0 225 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 POPDC2Q9HBU9 364 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 ATP13A1Q9HD20 1204 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 SOHLH2Q9NX45 425 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 FOXD3Q9UJU5 478 aaPredicted RBP6.89□□□□□ -1.31
SSXP3-201ENST00000442971 SERTAD3Q9UJW9 196 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 EIF3LQ9Y262 564 aaKnown RBP6.89□□□□□ -1.31
SSXP3-201ENST00000442971 ATP8A1Q9Y2Q0 1164 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 MALRD1Q5VYJ5 2156 aa6.89□□□□□ -1.31
SSXP3-201ENST00000442971 DYNC2H1Q8NCM8 4307 aaKnown RBP6.88□□□□□ -1.31
SSXP3-201ENST00000442971 E7EQ34 232 aa6.88□□□□□ -1.31
SSXP3-201ENST00000442971 GCNT3O95395 438 aa6.88□□□□□ -1.31
SSXP3-201ENST00000442971 HNF1AP20823 631 aa6.88□□□□□ -1.31
SSXP3-201ENST00000442971 ADH7P40394 386 aa6.88□□□□□ -1.31
SSXP3-201ENST00000442971 OCRLQ01968 901 aa6.88□□□□□ -1.31
SSXP3-201ENST00000442971 NUCB1Q02818 461 aa6.88□□□□□ -1.31
SSXP3-201ENST00000442971 GPR18Q14330 331 aa6.88□□□□□ -1.31
SSXP3-201ENST00000442971 IHHQ14623 411 aa6.88□□□□□ -1.31
SSXP3-201ENST00000442971 IL17AQ16552 155 aa6.88□□□□□ -1.31
SSXP3-201ENST00000442971 RBBP7Q16576 425 aa6.88□□□□□ -1.31
SSXP3-201ENST00000442971 TMEM249Q2WGJ8 235 aa6.88□□□□□ -1.31
SSXP3-201ENST00000442971 FBXL19-AS1Q494R0 122 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms