RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 C20orf96Q9NUD7 363 aaPredicted RBP4.71□□□□□ -1.66
EDEM3-203ENST00000439962 WSB2Q9NYS7 404 aaPredicted RBP4.71□□□□□ -1.66
EDEM3-203ENST00000439962 NCKIPSDQ9NZQ3 722 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 FAM8A1Q9UBU6 413 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 FASNP49327 2511 aaKnown RBP4.71□□□□□ -1.66
EDEM3-203ENST00000439962 EDDM13A0A1B0GTR0 161 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 CXorf51AA0A1B0GTR3 108 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 FAM149AA5PLN7 773 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 BBIP1A8MTZ0 92 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 VGLL3A8MV65 326 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 AHCYL1O43865 530 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 RHOBTB1O94844 696 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 WISP3O95389 354 aaPredicted RBP4.71□□□□□ -1.66
EDEM3-203ENST00000439962 ERVK-10P10266 1014 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 OGNP20774 298 aaKnown RBP4.71□□□□□ -1.66
EDEM3-203ENST00000439962 CD151P48509 253 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 ACADVLP49748 655 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 NOVA1P51513 510 aaKnown RBP4.71□□□□□ -1.66
EDEM3-203ENST00000439962 SUOXP51687 545 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 ALDH18A1P54886 795 aaKnown RBP4.71□□□□□ -1.66
EDEM3-203ENST00000439962 NSUN2Q08J23 767 aaKnown RBP eCLIP4.71□□□□□ -1.66
EDEM3-203ENST00000439962 TRAP1Q12931 704 aaKnown RBP4.71□□□□□ -1.66
EDEM3-203ENST00000439962 GRIK2Q13002 908 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 ZBTB17Q13105 803 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 KLF10Q13118 480 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 C1orf61Q13536 156 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 ELAVL3Q14576 367 aaKnown RBP4.71□□□□□ -1.66
EDEM3-203ENST00000439962 EIF4HQ15056 248 aaKnown RBP4.71□□□□□ -1.66
EDEM3-203ENST00000439962 ACAP2Q15057 778 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 FAM83EQ2M2I3 478 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 ARTNQ5T4W7 220 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 STPG1Q5TH74 334 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 AGAP9Q5VTM2 703 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 C1orf146Q5VVC0 180 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 LRRC8EQ6NSJ5 796 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 CHSY3Q70JA7 882 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 EFL1Q7Z2Z2 1120 aaKnown RBP4.71□□□□□ -1.66
EDEM3-203ENST00000439962 DGLUCYQ7Z3D6 616 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 PTAR1Q7Z6K3 402 aaPredicted RBP4.71□□□□□ -1.66
EDEM3-203ENST00000439962 WDR5BQ86VZ2 330 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 TMEM151AQ8N4L1 468 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 POP5Q969H6 163 aaKnown RBP4.71□□□□□ -1.66
EDEM3-203ENST00000439962 AZIN2Q96A70 460 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 L3HYPDHQ96EM0 354 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 ALG14Q96F25 216 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 IMP4Q96G21 291 aaKnown RBP4.71□□□□□ -1.66
EDEM3-203ENST00000439962 CCT7Q99832 543 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 GABRG3Q99928 467 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 ECSITQ9BQ95 431 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 OSBPL1AQ9BXW6 950 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 SLC2A11Q9BYW1 496 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 IRF2BPLQ9H1B7 796 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 MUC13Q9H3R2 512 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 NOL6Q9H6R4 1146 aaKnown RBP4.71□□□□□ -1.66
EDEM3-203ENST00000439962 SUN2Q9UH99 717 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 PADI4Q9UM07 663 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 CDYLQ9Y232 598 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 VPS9D1Q9Y2B5 631 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 PSAT1Q9Y617 370 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 COMMD10Q9Y6G5 202 aa4.71□□□□□ -1.66
EDEM3-203ENST00000439962 ZNF106Q9H2Y7 1883 aaKnown RBP4.7□□□□□ -1.66
EDEM3-203ENST00000439962 A0A1W2PQU0 124 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 MED19A0JLT2 244 aaPredicted RBP4.7□□□□□ -1.66
EDEM3-203ENST00000439962 IGLON5A6NGN9 336 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 DRGXA6NNA5 263 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 MUSKO15146 869 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 BCAT2O15382 392 aaPredicted RBP4.7□□□□□ -1.66
EDEM3-203ENST00000439962 BUD23O43709 281 aaKnown RBP4.7□□□□□ -1.66
EDEM3-203ENST00000439962 ITM2AO43736 263 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 SH3BP5O60239 455 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 VPS4BO75351 444 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 ZNF217O75362 1048 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 KRT36O76013 467 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 SLC35E2BP0CK96 405 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 HLA-DPA1P20036 260 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 DRD3P35462 400 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 SERPINH1P50454 418 aaKnown RBP4.7□□□□□ -1.66
EDEM3-203ENST00000439962 ADPRHP54922 357 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 MXRA7P84157 204 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 IL10RBQ08334 325 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 FOXC1Q12948 553 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 STX5Q13190 355 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 ITGA9Q13797 1035 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 ZNF235Q14590 738 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 ADRM1Q16186 407 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 KIF19Q2TAC6 998 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 RALGPS1Q5JS13 557 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 MPP7Q5T2T1 576 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 LAIR1Q6GTX8 287 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 DENND5AQ6IQ26 1287 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 FAM45BPQ6NSW5 357 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 PRMT9Q6P2P2 845 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 KDELC1Q6UW63 502 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 MAVSQ7Z434 540 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 PDSS2Q86YH6 399 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 GALNT13Q8IUC8 556 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 FAM217AQ8IXS0 508 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 ZNF683Q8IZ20 524 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 KYQ8NBH2 561 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 ADCY4Q8NFM4 1077 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms