RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 SFRP1Q8N474 314 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 METTL6Q8TCB7 284 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 CCDC97Q96F63 343 aaPredicted RBP18.32■□□□□ 0.52
CLK1-205ENST00000434813 HERC2P3Q9BVR0 1158 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 TRIM8Q9BZR9 551 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 CIPCQ9C0C6 399 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 PNPLA3Q9NST1 481 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.32■□□□□ 0.52
CLK1-205ENST00000434813 TCRBV5S2A0A599 114 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 K7ERQ8 282 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 GLUD1P00367 558 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 TIMP1P01033 207 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 TRBC1P01850 177 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 ENO2P09104 434 aaPredicted RBP18.32■□□□□ 0.52
CLK1-205ENST00000434813 FCGR1AP12314 374 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 ITGALP20701 1170 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 MAPK8P45983 427 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 RGS4P49798 205 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 NR1H2P55055 460 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 PRKG2Q13237 762 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 LSAMPQ13449 338 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 NFATC2Q13469 925 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 GTF2H2Q13888 395 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 RAB33AQ14088 237 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 SLC5A9Q2M3M2 681 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 RETSATQ6NUM9 610 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 GTF2H2CQ6P1K8 395 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 PRR23BQ6ZRT6 265 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 DPP10Q8N608 796 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 OR4F6Q8NGB9 312 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 TMEM169Q96HH4 297 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 ZFYVE1Q9HBF4 777 aa18.32■□□□□ 0.52
CLK1-205ENST00000434813 TRBV5-4A0A0C4DH59 114 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 SAC3D1A6NKF1 404 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 VILLO15195 856 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 EFCAB14O75071 495 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 SOCS5O75159 536 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 H6PDO95479 791 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 OTCP00480 354 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 CSF2RAP15509 400 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 EPHB3P54753 998 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 ZXDBP98169 803 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 EMX2Q04743 252 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 TRAF3Q13114 568 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 IL27RAQ6UWB1 636 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 RBM44Q6ZP01 1051 aaKnown RBP18.31■□□□□ 0.52
CLK1-205ENST00000434813 TRPV3Q8NET8 790 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 LKAAEAR1Q8TD35 194 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 VWCEQ96DN2 955 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 ZNF558Q96NG5 402 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 HAUS8Q9BT25 410 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 BOCQ9BWV1 1114 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 ZNF334Q9HCZ1 680 aaPredicted RBP18.31■□□□□ 0.52
CLK1-205ENST00000434813 C8orf4Q9NR00 106 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 PTTG2Q9NZH5 202 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 OARD1Q9Y530 152 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 INSL5Q9Y5Q6 135 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 CPQQ9Y646 472 aa18.31■□□□□ 0.52
CLK1-205ENST00000434813 C1orf232A0A0U1RR37 186 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 LSM1O15116 133 aaKnown RBP18.3■□□□□ 0.52
CLK1-205ENST00000434813 CSNK1DP48730 415 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 CCT8P50990 548 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 BCL2L1Q07817 233 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 DYNC1I2Q13409 638 aaKnown RBP18.3■□□□□ 0.52
CLK1-205ENST00000434813 CYP51A1Q16850 503 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 C18orf21Q32NC0 220 aaPredicted RBP18.3■□□□□ 0.52
CLK1-205ENST00000434813 AASDHQ4L235 1098 aaPredicted RBP18.3■□□□□ 0.52
CLK1-205ENST00000434813 KRT80Q6KB66 452 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 BORAQ6PGQ7 559 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 TCEAL8Q8IYN2 117 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 APCDD1Q8J025 514 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 SLC39A11Q8N1S5 342 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 CBR4Q8N4T8 237 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 ARL14EPQ8N8R7 260 aaPredicted RBP18.3■□□□□ 0.52
CLK1-205ENST00000434813 OR6K2Q8NGY2 324 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 TFAP2CQ92754 450 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 ISG20Q96AZ6 181 aaKnown RBP18.3■□□□□ 0.52
CLK1-205ENST00000434813 CENPNQ96H22 339 aaPredicted RBP18.3■□□□□ 0.52
CLK1-205ENST00000434813 ASB8Q9H765 288 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 INTS7Q9NVH2 962 aaKnown RBP18.3■□□□□ 0.52
CLK1-205ENST00000434813 EVLQ9UI08 416 aaPredicted RBP18.3■□□□□ 0.52
CLK1-205ENST00000434813 PTBP2Q9UKA9 531 aaKnown RBP18.3■□□□□ 0.52
CLK1-205ENST00000434813 DMTF1Q9Y222 760 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 KANSL1LA0AUZ9 987 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 ARHGAP10A1A4S6 786 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 INPP4BO15327 924 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 SMAD6O43541 496 aaKnown RBP18.3■□□□□ 0.52
CLK1-205ENST00000434813 MTHFD1P11586 935 aaKnown RBP18.3■□□□□ 0.52
CLK1-205ENST00000434813 UGT1A6P19224 532 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 HTR1EP28566 365 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 CA5AP35218 305 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 ARL1P40616 181 aaPredicted RBP18.3■□□□□ 0.52
CLK1-205ENST00000434813 DEFB103AP81534 67 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 ATP6AP1Q15904 470 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 CDKN3Q16667 212 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 MYLK3Q32MK0 819 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 LYPLAL1Q5VWZ2 237 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 NANOGP8Q6NSW7 305 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 NECAB2Q7Z6G3 386 aa18.3■□□□□ 0.52
CLK1-205ENST00000434813 TMCO2Q7Z6W1 182 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms