RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 KCNJ13O60928 360 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 SLC35G4P0C7Q5 338 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 SLC2A4P14672 509 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 CHRM3P20309 590 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 SSTR1P30872 391 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 SLC1A2P43004 574 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 PREPP48147 710 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 PRLHRP49683 370 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 MPP1Q00013 466 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 RNF187Q5TA31 235 aaPredicted RBP14.29□□□□□ -0.12
SGCE-204ENST00000428696 TRMT10BQ6PF06 316 aaKnown RBP14.29□□□□□ -0.12
SGCE-204ENST00000428696 IYDQ6PHW0 289 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 OGFOD3Q6PK18 319 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 DHRS13Q6UX07 377 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 PACS1Q6VY07 963 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 ZNF761Q86XN6 746 aaPredicted RBP14.29□□□□□ -0.12
SGCE-204ENST00000428696 NAGSQ8N159 534 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 LILRA3Q8N6C8 439 aaPredicted RBP14.29□□□□□ -0.12
SGCE-204ENST00000428696 GPR156Q8NFN8 814 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 GPR150Q8NGU9 434 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 GSDMBQ8TAX9 411 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 BAHD1Q8TBE0 780 aaPredicted RBP14.29□□□□□ -0.12
SGCE-204ENST00000428696 SLC37A2Q8TED4 501 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 SKA2Q8WVK7 121 aaPredicted RBP14.29□□□□□ -0.12
SGCE-204ENST00000428696 CCDC74AQ96AQ1 378 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 CXorf40BQ96DE9 158 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 WDR83Q9BRX9 315 aaKnown RBP14.29□□□□□ -0.12
SGCE-204ENST00000428696 ZMYND15Q9H091 742 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 STN1Q9H668 368 aaKnown RBP14.29□□□□□ -0.12
SGCE-204ENST00000428696 IMP3Q9NV31 184 aaKnown RBP14.29□□□□□ -0.12
SGCE-204ENST00000428696 SLC17A6Q9P2U8 582 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 GNPTGQ9UJJ9 305 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 TSR3Q9UJK0 312 aaKnown RBP14.29□□□□□ -0.12
SGCE-204ENST00000428696 WDR37Q9Y2I8 494 aa14.29□□□□□ -0.12
SGCE-204ENST00000428696 CFAP20Q9Y6A4 193 aaKnown RBP14.29□□□□□ -0.12
SGCE-204ENST00000428696 LY6G6EA0A0G2JKS1 128 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 E5RI56 91 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 E7ESA3 106 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 RFPL3O75679 317 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 PIAS1O75925 651 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 HAUS5O94927 633 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 S1PR4O95977 384 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 VIPP01282 170 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 F3P13726 295 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 OGNP20774 298 aaKnown RBP14.28□□□□□ -0.12
SGCE-204ENST00000428696 MAPK9P45984 424 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 HSPA14Q0VDF9 509 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 FOXC1Q12948 553 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 CLCA4Q14CN2 919 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 AMZ1Q400G9 498 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 ZNF789Q5FWF6 425 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 PERM1Q5SV97 790 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 N4BP2L1Q5TBK1 243 aaPredicted RBP14.28□□□□□ -0.12
SGCE-204ENST00000428696 METRNLQ641Q3 311 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 SLC9B2Q86UD5 537 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 HM13Q8TCT9 377 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 NAT6Q93015 286 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 FMO2Q99518 471 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 SLC38A3Q99624 504 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 CCDC3Q9BQI4 270 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 FOXP3Q9BZS1 431 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 ZDHHC18Q9NUE0 388 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 INTS10Q9NVR2 710 aaKnown RBP14.28□□□□□ -0.12
SGCE-204ENST00000428696 SCHIP1Q9P0W5 487 aaPredicted RBP14.28□□□□□ -0.12
SGCE-204ENST00000428696 ACSL5Q9ULC5 683 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 NFU1Q9UMS0 254 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 VPS9D1Q9Y2B5 631 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 U3KQA8 63 aa14.28□□□□□ -0.12
SGCE-204ENST00000428696 EME2A4GXA9 379 aaPredicted RBP14.27□□□□□ -0.12
SGCE-204ENST00000428696 OR5K4A6NMS3 321 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 GLB1P16278 677 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 ACP1P24666 158 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 PDHA2P29803 388 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 ABCG1P45844 678 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 ACADVLP49748 655 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 CLDN6P56747 220 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 OR1D5P58170 312 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 HHEXQ03014 270 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 MGAT5Q09328 741 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 TYSND1Q2T9J0 566 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 CNSTQ6PJW8 725 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 GLRX5Q86SX6 157 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 LRRC6Q86X45 466 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 LMNTD2Q8IXW0 634 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 SFRP1Q8N474 314 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 CHCHD4Q8N4Q1 142 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 CFAP61Q8NHU2 1237 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 SEC14L1Q92503 715 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 LPGAT1Q92604 370 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 TMEM159Q96B96 161 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 ATXN7L3BQ96GX2 97 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 LINC00615Q96LM1 132 aaPredicted RBP14.27□□□□□ -0.12
SGCE-204ENST00000428696 C12orf66Q96MD2 445 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 ZFATQ9P243 1243 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 CPNE7Q9UBL6 633 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 PCDHB1Q9Y5F3 818 aa14.27□□□□□ -0.12
SGCE-204ENST00000428696 CNOT1A5YKK6 2376 aaKnown RBP14.27□□□□□ -0.13
SGCE-204ENST00000428696 KIR2DS5A0A0G2JLQ3 304 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 PRAMEF33A0A0G2JMD5 474 aa14.26□□□□□ -0.13
SGCE-204ENST00000428696 A0A0G2JNG1 304 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms