RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 CAPNS1P04632 268 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 CYBBP04839 570 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 NCK1P16333 377 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 SLC6A2P23975 617 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 UFM1P61960 85 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 INPP5AQ14642 412 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 TEAD2Q15562 447 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 TIGD2Q4W5G0 525 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 PRMT9Q6P2P2 845 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 KLHDC10Q6PID8 442 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 TPGS1Q6ZTW0 290 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 GPSM1Q86YR5 675 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 TMC8Q8IU68 726 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 CBR4Q8N4T8 237 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 CCT7Q99832 543 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 OSBPL11Q9BXB4 747 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 TRIM15Q9C019 465 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 NDUFA13Q9P0J0 144 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 DNMT3BQ9UBC3 853 aaKnown RBP10.54□□□□□ -0.72
CUX1-205ENST00000425244 CNOT11Q9UKZ1 510 aaKnown RBP10.54□□□□□ -0.72
CUX1-205ENST00000425244 CCL26Q9Y258 94 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 PLOD2O00469 737 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 VILLO15195 856 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 HTRA2O43464 458 aaPredicted RBP10.54□□□□□ -0.72
CUX1-205ENST00000425244 CLDN11O75508 207 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 RB1P06400 928 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 RHOP08100 348 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 RPS17P08708 135 aaKnown RBP10.54□□□□□ -0.72
CUX1-205ENST00000425244 ITGB6P18564 788 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 PSMA4P25789 261 aaKnown RBP10.54□□□□□ -0.72
CUX1-205ENST00000425244 OXTRP30559 389 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 IL2P60568 153 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 PRKCQQ04759 706 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 UBE3AQ05086 875 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 DYNC1I2Q13409 638 aaKnown RBP10.54□□□□□ -0.72
CUX1-205ENST00000425244 MAP7Q14244 749 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 MYBPC3Q14896 1274 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 ALG1LQ6GMV1 187 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 BLOC1S3Q6QNY0 202 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 ERMP1Q7Z2K6 904 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 NKAPQ8N5F7 415 aaKnown RBP10.54□□□□□ -0.72
CUX1-205ENST00000425244 TSPAN14Q8NG11 270 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 GRIN3AQ8TCU5 1115 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 DTNBP1Q96EV8 351 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 KLF16Q9BXK1 252 aaPredicted RBP10.54□□□□□ -0.72
CUX1-205ENST00000425244 SLC46A2Q9BY10 475 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 SLC2A11Q9BYW1 496 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 CFAP97Q9P2B7 532 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 MSRAQ9UJ68 235 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 PCTPQ9UKL6 214 aa10.54□□□□□ -0.72
CUX1-205ENST00000425244 OAS3Q9Y6K5 1087 aaKnown RBP10.54□□□□□ -0.72
CUX1-205ENST00000425244 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.53□□□□□ -0.72
CUX1-205ENST00000425244 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.53□□□□□ -0.72
CUX1-205ENST00000425244 ARHGAP10A1A4S6 786 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 ARPC2O15144 300 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 OR4F21O95013 312 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 MT-ND1P03886 318 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 ZNF24P17028 368 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 CTPS1P17812 591 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 IL10P22301 178 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 RPL10P27635 214 aaKnown RBP10.53□□□□□ -0.72
CUX1-205ENST00000425244 HK3P52790 923 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 TRAF2Q12933 501 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 LSAMPQ13449 338 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 CYP51A1Q16850 503 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 C18orf21Q32NC0 220 aaPredicted RBP10.53□□□□□ -0.72
CUX1-205ENST00000425244 CTSL3PQ5NE16 218 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 GPRIN3Q6ZVF9 776 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 GPR65Q8IYL9 337 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 TRIML2Q8N7C3 387 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 FNDC5Q8NAU1 212 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 OR6K2Q8NGY2 324 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 ZFP28Q8NHY6 868 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 C17orf50Q8WW18 174 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 TMEM74Q96NL1 305 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 TCF12Q99081 682 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 ADGRE3Q9BY15 652 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 DDX18Q9NVP1 670 aaKnown RBP10.53□□□□□ -0.72
CUX1-205ENST00000425244 SLAMF8Q9P0V8 285 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 ZNF225Q9UK10 706 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 RIMKLBQ9ULI2 386 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 GPR45Q9Y5Y3 372 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 RNF103-CHMP3A0A140T963 221 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 ANKRD66B4E2M5 251 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 PFDN6O15212 129 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 VPS4BO75351 444 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 TMCC1O94876 653 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 ESRRBO95718 433 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 CR2P20023 1033 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 PPP3CCP48454 512 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 TTPAP49638 278 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 ERVK-21P61565 698 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 ILF2Q12905 390 aaKnown RBP10.53□□□□□ -0.72
CUX1-205ENST00000425244 PAGE3Q5JUK9 113 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 ADGRF1Q5T601 910 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 FRA10AC1Q70Z53 315 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 CARNMT1Q8N4J0 409 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 MINDY1Q8N5J2 469 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 FAM47BQ8NA70 645 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 OR52B6Q8NGF0 335 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms